Cyprinodon variegatus (sheepshead minnow): 107084518
Help
Entry
107084518 CDS
T06110
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
107084518
NCBI-ProteinID:
XP_015229883
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MALTGWLWLWRMPLLLTLLHSCFLSASASTTSFPKDLEPLHVVSSEQSYQYPGFQGLLQD
NDTLRLGLDFQRMLRINHILYIAARDHVFAVNLTTASEEFVPQLKLTWKSKDVSKCTVRG
KNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLEQVGEEVVGQARCPFESIQ
SNVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFQHAIDYGN
YVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSF
FYFDVLQSLTNVLQINQRPAVVGVFTTQSNSIPGSAVCAFYMDDIEKVFNGKFKEQRTSD
SSWTPVPDEQVPRPRPGTCAGDGPASDYKSSVQFPDEMLTFIKSYPLMDEAVPSVNDRPC
FTRTSSRSKLTQIVVDVSAGPLKDRTVMFLGSDDGHVLKVLASTHPNDSFGSKLLEDIDV
YNPSKCNVQGQEDRRVLGLELDKDHHALFVAFTSCVIRIPLSRCTQHGACKKACLASRDP
YCIWLRTGTCANMAPGFKAGFEQDIEGDHSFYPDNCHTDLLATTRNQESAADSAYGVRRP
PELDQRANANVHYTLLIACVFVAFFLGAILSGFLVSCYCSRSATHRAQRLGKDPEASLPH
ALSLRSLAKLNGLLDGQPKDDKLDVSTPKMYSSFIPNGRAEPHLHTPGHQGLQLGDPDLN
LSQSLSQGDGELSGLPTPDSTPEMPFRNLKGLRHQQYEKNQNCNNGKDSIPKSGPSSSKS
SQGFMAVVGNSLSQQMFPFPHHNGGSLSNGAAHGAGASSTSLHLLEERKIPNDERGAATG
GGGGVPHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTSSSSLFPGPSS
SGAGHHSSHHHHHHHHNQHNQTRTHHYNHSHHHSNHHNNNSSSHHHQQQIPETEPTSYCS
TSTLPRDGVPKRLDSAPQNSTSSSATSSSSSSSSNNPTSSTSIPSSSSSSSSTPLQQQVI
PERPGGSAVPVSRHQSQRHSLIKMGAAGGAVPRHHSFNQRGTHAHFLARMNTNNNSSSNN
RPPGSSAAVNTNTSNNGESQRAAVASACLTRQHSYSEGPHVQRAAIVRRTVSLKPQIPPK
PLFLPNTATSAVTEAQKYNY
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccctgaccggctggctgtggctatggcggatgccgttgttgctgacattgcttcat
tcgtgctttctgtctgcgtctgcctcgaccacatccttccccaaagacctggaaccgctc
catgttgtcagctcggagcagtcgtaccagtatcccggttttcagggtctactacaggac
aacgacacattgcgcttgggcctggactttcagaggatgttgcgcattaatcatattctt
tatatcgcagcaagggatcatgtctttgctgtgaacctaacgacagcatcagaggagttt
gttccacagctgaagctgacatggaaatccaaagatgtcagcaagtgtacagtcagggga
aagaacagcgatgagtgctacaactacgtcaaagttctggttcctcgaaatgatgagact
ttgtttgcttgtggtaccaacgcctttaacccgacctgcaggaactacaagatgacctcc
ttggaacaggttggagaagaagtggtcggtcaggctcgctgtccatttgaatccatccag
tctaatgttggactgtttgctgggggagacttctattcagccaccatgacagactttctt
gcgagcgacgccgtcatctacagaagccttggcgagggccgaccagtcctcaggacggtc
aaatatgactccaaatggctccgagagcctcatttccagcacgccattgactatggtaac
tatgtctactttttcctgagtgagatcgcagtggaatacacagccctgggcaaggttgtg
ttttctcgagttgcacgagtctgtaagaacgataacggaggttcccccagagttctggaa
agatactggacttcattcctgaaggctcgtttaaactgttcagttcctggagactcgttc
ttctactttgacgttcttcagtctctgacaaatgtgctgcagatcaaccagaggccggcg
gttgttggcgtgtttaccacccagtccaacagtatcccaggttcagcggtttgtgccttc
tatatggacgacattgagaaagtctttaacgggaagttcaaagagcagagaaccagtgac
tcatcctggactccagtcccagatgagcaggttcccagaccaagacctggtacctgtgca
ggcgatggcccagcctcagattacaaatcttcagttcagtttccagatgaaatgttaacc
ttcattaaatcatatcctctgatggatgaggctgtaccttcagtcaatgatcggccctgc
tttacccgaacatccagcaggtcaaagttgacccagattgtggttgatgtttcagctggt
ccccttaaggacagaacggtgatgttcctgggctcagacgatggccatgtcctgaaagtt
ctggctagcacacatcccaatgacagctttgggtccaaactgctagaggacatcgacgtg
tataacccctccaagtgcaatgttcagggccaggaggacagaagagttctgggactggag
ttggataaagaccatcacgcattgtttgttgcctttaccagctgtgttatcagaatacca
ctcagccgctgcacccaacatggagcctgcaaaaaagcatgcctggcctcccgtgaccct
tactgcatctggcttcgcacggggacttgtgccaacatggcaccaggcttcaaggcgggg
ttcgaacaggatatagagggtgaccactctttttacccagacaactgtcacactgatctt
ttggcaacaacacggaaccaggagtcggctgctgactctgcctatggtgttcgtcgtcca
cctgagctggaccagcgtgctaacgccaacgtccactacaccctgctgattgcctgcgtt
ttcgttgcattctttctgggagccatcctgtcgggtttcttggtgtcatgttactgcagc
cgcagtgcaacacaccgagctcaaaggctagggaaggaccccgaagcttcgctgccgcac
gctctgtcccttcgttcgctcgccaagctgaacggcctgctggatgggcaacccaaggat
gacaagctggacgtgtcgacaccaaaaatgtacagctccttcatccctaatgggcgggcc
gagccccaccttcacacccctgggcatcagggcctgcagctgggagaccctgacctcaac
ctgtcacagtctctttctcagggtgacggagaactgtctggcctgccaacacctgactcc
acaccagaaatgccattcaggaacctaaaaggactgcggcatcagcagtacgagaagaac
caaaactgcaacaacggcaaggatagcatcccaaagtcggggcctagcagctccaaatcc
agtcagggcttcatggccgtcgttgggaattctttgagtcagcaaatgtttccctttcct
catcacaatggtggcagtttgagcaatggggcagcccatggagcaggtgcctcgtcgact
tcactgcacctcctggaggagaggaagatcccaaatgatgagcgaggtgctgccacagga
ggagggggaggagttccacatcaccaccactcccagcagtccctacctcagacggtggtg
gatgtgtctgcgctggatgagctgctcaaacacatccatgaggtcagcgcgtcaggaacg
ggtggaatcaaggtcctcacgtccacctcgtcctcctcactgttccctggaccatcctct
tctggagcaggacatcacagtagtcatcaccaccaccatcatcatcacaatcaacacaac
cagacacgaacacaccactacaaccacagccatcaccacagcaaccatcacaataataac
agcagcagccatcatcaccagcagcaaatcccggagacagaacccacttcctattgcagc
acctctacactgccaagggatggcgtacccaaacgcttggattcagcccctcagaactcc
acctcctcctctgccacgtcttcttcttcatcctcctcttcaaacaaccccacatcctcc
acctccatcccttcttcatcctcttcttcgtcctccactcccctccaacagcaggtgatt
ccggagcggcccggagggagcgccgtccccgtgtcacgtcaccagtcccagcgtcactcc
ctcattaaaatgggtgcagcaggtggcgctgtgccccgccatcacagcttcaaccaacgg
gggacgcacgcgcactttctggccaggatgaacaccaacaacaacagcagcagcaacaac
cgccccccaggttcatctgcagcagtcaacacaaacaccagcaacaacggcgagagccaa
cgggcagcggttgccagcgcctgcttgacgcggcagcacagttacagcgaagggccgcac
gttcagcgggccgcgatcgtacggagaacggtgtccctcaagccacagattccaccaaaa
ccgctttttctcccaaatacagcaacgtctgcagtaacagaggcacagaaatacaactac
tga
DBGET
integrated database retrieval system
