Cyprinodon variegatus (sheepshead minnow): 107084520
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Entry
107084520 CDS
T06110
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1
KO
K25400
sodium channel and clathrin linker 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107084520 (sclt1)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107084520 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCCAP
DuoxA
Motif
Other DBs
NCBI-GeneID:
107084520
NCBI-ProteinID:
XP_015229887
Ensembl:
ENSCVAG00000022218
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
TAVHRLNSALCRHQQGGTSSLLDEEQQAESLPPWLSDKGIMAPLIAEYDRHMDEMTKQLQ
NYQEMMTDVRAKLEKVVEENERLHTELRESVEKQLHTLPVASVVEGSTVEDAVIIKNLQE
QVQLSEQERTQAMELCQTTAQELDRLQQVYQRTISDKQLHDTQRQQLKDQLVQFQQHSYK
LQATNQKLESTNQHLLKTVIEQSSEMEELHCQLRQSNIELKTATAKVDEMTKVIQNLKEQ
LQRREEDITVAKDREDSADRRLQQLQTTLSQLETRLKAASLEAEAVHREQAVWERKVGEL
QALCTTLEEEKFEAHCKVRENVQMAEEAVLQKEQSLLREKQKTEELEKTKQAIKHLIQEA
AVRTRKEVENVRKQCNIQIDHMAEKLSALQLECTDKESQIQRSLRERKAVEEELEKVYKE
GKPEPEFWKIEALHQRCLNAERLKDDINLTLQSTQNKLKKMEMDYNEELSWSQEEVRRLQ
GLLAAARSDCIGVSEERLQLQQENIQLHKEMNELRKASIQIQREAKQKVSQMEQACSLKE
RGLDARMRELEERSRNSTADLTRLLAAAQKSTQQWKEEAKNLVQTFETKITALKAELKRQ
KQRSRELEIQLETDRNTISEYEKQLGEYQEKTSRLQRRLTQTEQKASTASHQLSLLASER
RKPYTVVSGDL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
actgcagtccacaggttgaattctgctctctgtcggcatcagcaagggggcacatcttct
ctgctggatgaagagcagcaagcagagtctcttcctccctggctttcagacaaagggata
atggctcctcttatagcagagtatgatcgacacatggacgaaatgaccaagcagcttcag
aactatcaggagatgatgacagacgtgagagcaaagctggaaaaggttgtggaggaaaat
gaaaggttgcacacagagctgagggagtcagtggagaagcaactccacaccctgcctgtc
gcttcagtggtagagggcagcacagtagaagatgctgtcatcattaaaaacctgcaggaa
caagttcagctttctgagcaggagcggacgcaggccatggagctgtgtcaaacgacggcc
caggagctggaccgcctacagcaggtctaccagaggaccatctctgacaagcagcttcac
gatactcaaaggcagcagctcaaggatcagctcgttcagttccagcagcactcttacaaa
ctccaagcgaccaatcagaaattggaatcgacgaaccagcatctcctgaagacggtcata
gagcagagctcagaaatggaggagctgcactgccaactcaggcagtccaacattgaactc
aagacagccacagccaaagtggatgagatgaccaaagtcatacagaatctcaaggagcaa
ttgcaaagaagagaggaagacataactgtagctaaggacagggaggacagcgcagacagg
cgactccagcagcttcaaacaaccctgagccaactggaaacccggctaaaggctgcatct
ctggaggctgaggcagttcacagagagcaagctgtgtgggagagaaaggtgggggaactc
caggctctttgcaccaccctagaagaggagaagttcgaggctcattgcaaagtcagggag
aatgttcaaatggctgaagaggctgttttacagaaggagcagtcccttttaagagaaaaa
cagaagacagaggaactagaaaagacaaagcaggccatcaaacacttgatccaggaggct
gcagtccgaaccaggaaggaggtggaaaacgtgcgcaagcagtgcaacatccaaattgat
catatggcagagaagctgtctgcactgcagttggagtgcacagataaagagtctcagatt
caaagatctttgcgtgagagaaaagctgtagaagaagaactagagaaggtgtataaggaa
ggcaaaccagagccagagttttggaaaattgaggccctacatcagaggtgtctaaatgca
gagaggttgaaggacgacataaatctcactctccaaagcactcagaataagctgaaaaag
atggagatggactataacgaggaactgtcttggtcccaggaagaggtacggcgactgcag
ggcttactagctgcagctcggagtgactgcattggtgtcagcgaggagcggcttcagctg
cagcaggagaacatacagctgcacaaggaaatgaatgagctgcgcaaggctagcatacag
atacaaagggaggcaaagcagaaggtttcacagatggagcaagcatgcagcctcaaagag
cggggacttgacgcgcggatgagggaacttgaggaaaggagccgaaactctactgctgat
ctgacacgcctccttgcagcggcacagaaaagcactcagcaatggaaggaagaggcaaag
aacctagttcagacctttgaaactaaaatcacagctctcaaggcagaactgaaacggcag
aaacagcgttcgcgtgagttagagattcagctcgaaacggaccgtaacacaatatctgag
tatgagaaacagcttggtgaatatcaagaaaagacgagtcgtctccagagaagactgaca
caaactgaacagaaggcatctacagcttcccatcagctgagcctgctggcatctgagcgc
aggaaaccttacactgtggtttcaggagatctatga
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