Cyprinodon variegatus (sheepshead minnow): 107084524
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Entry
107084524 CDS
T06110
Symbol
pcdh10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107084524 (pcdh10)
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Protocadherins
107084524 (pcdh10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107084524
NCBI-ProteinID:
XP_015229891
Ensembl:
ENSCVAG00000022200
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MIWFIFLLSIVNGVLCQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALLVKEKIDREEICKQTIPCLMHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGTKFAE
LVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPTFNESVYTINLRE
NSPVGTLVIQLTATDVDEGQNGEIVYSFSNHNTPRIKDLFTIDARTGRIEVAGEVDYEES
NTHQINVQAKDLGANAVPAHCKVLVKLLDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGQMSCEILGDVPFKLKSSFKNYYTIVTDGSLDRENTDSYTITVVAKDRGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAVELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISAKRDPQSLYDLLIEVRDHGQPPLSSSASVSVLLVDSVVE
GRSGDRGSASKSKDTSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCFCCGSCCSRQSRGRKQKKLSKSDIMLVQSTNVSTGVGPVGQVPVEESGVGGVGGGFG
SHHHQTQNSYCYQVCLTPESAKTDLMFLKPCSPSRSSEADHTNPCGAIVTGYSDQQPDIL
SNGGILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
CSVNLPDQLTMTSSTASSNDRSFSTFGKDGQRSQSHHSLQNHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYETSLGPFDFSLVQHRN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttggtttatatttctgctctccattgtgaatggagttctatgtcagctgcactac
tcagtaccagaggagcaagagcctggctccgttgttgggaatatagcggaagatctgggg
ttggacatcacaaaactttccgctcgccgattccagactgtgccaagttctaggacacct
tatctggaggtgaacctggagaacggcgcgcttttggtgaaggaaaaaatagaccgggaa
gaaatctgcaagcagacaatcccatgcttaatgcatctggaggtgtttttggagaatcct
ctggagctcttccgcgtggaaatcgaagtgatggatattaacgacaatccgcccagcttc
ccagaaacggacatttcagtggaaatatctgagagtgccatacccggaacgcgtttccca
gtggagaacgcatttgatcccgacgtcggcaccaacgcgctcagcacttatgctataact
aacaataactatttttacctcgacgtgcagacgcagagcgatggcaccaaatttgcggag
ctggtgctggagaaaccgctggacagagagcagcaggcggtccatcgctatgtgctgacg
gctgtggatggaggcgtcccgcagcgaaccgggacggcgcttctggttgttaaagttctg
gactctaatgacaacgcacccacgttcaacgagtctgtttacacaattaatctgcgggaa
aactctcctgttgggactctagtcatccagctcaccgccacagatgtagacgagggacaa
aacggagaaatagtttattccttcagtaatcacaacaccccacgaataaaggatttattc
accatcgatgccagaacgggcaggatagaagtggcaggtgaggtggactatgaagagagc
aatacgcaccagatcaatgtgcaggcgaaagatctgggtgccaatgccgtccctgcgcac
tgcaaagtgctggtcaaactcctggacgtgaacgacaacacgcctgagatcggcttcagc
actgtaactgagtctgtgagcgaacaggacgcccctggcaccgtgattgccctgttcagc
gtctcggatcgagactctggtgagaacggtcagatgagctgtgaaatcctgggcgacgtc
cctttcaagttaaagtcttcgtttaaaaattactacaccatcgtaacggacggctcactg
gacagagaaaacacggactcatacaccatcaccgtggtggccaaagacagaggtcagccc
tcgctggcaaccagtaaatctattaaggtgcatgtgtccgacgaaaacgacaacgcgccc
cgctttacgcaggcagtttatgatgtgtatgtaactgaaaacaacgtgcctggggcattc
attcatgcagtgagcgccctggaccctgatataggacagaatgctctaattacctactcc
atattggagtgtgacatccagggcatgtctgtggacacatatgtctccataaaccaagac
accggctatctttacgcgctgcgctctttcgactacgaacagctgaaagagttcagcttc
atggttcaggctaaagactcaggtgctgtggagctgttctctaatgccactgtaaacgtc
atcatcgttgaccaaaatgataacgctcccactgttatagctcctataggaaagaatgga
acagctaaggagcacctgccgcgctctgcggagcctggatacctggtgacgcgcatcgtg
gccatggacgcagatgatggcgaaaacgcacggctttcctacagcatcctgaggggcaat
gagatggggatgtttcggatggactggaggacaggagagctgagaacggcgcgcaggata
tccgccaaacgggacccacagagcttgtatgacctgctgatcgaggtgcgggaccacggg
cagccccctctctcctcatcagccagtgtgagcgtgttactggtggacagcgtggtggag
ggccgcagtggggaccgcggctcggcctctaagtctaaagatacctcccttgatcttacc
ctgattcttatcatcgctctgggctcagtgtcatttattttcctcctggccatgatcgtg
ctggctgtgcgctgccaaaaggacaagaagctcaacctttacacatgtctgctagccgga
gattgctgcttctgctgcggctcttgctgtagccggcagagtcgcggcagaaagcagaaa
aaactgagcaaatcagacatcatgctggttcagagcaccaacgtgagcacgggagttggg
cccgtcgggcaggtgccagtggaggagtcaggggtggggggcgtgggaggggggttcggc
tcccaccaccaccagacccagaactcctactgctaccaggtgtgcctgacaccggagtcc
gccaagacggatctgatgtttttgaagccgtgcagcccctcccgcagcagcgaggcagac
cacaccaacccctgcggggccatagtcaccggctacagtgatcagcagcctgacatttta
tctaatggtggcattctatccagcgagacaaaacaccaacgagcagaactcagctatctg
gtggacagaccgaggcgtgtcaacagttctgcatttcaagaagcagacattgtcagttct
aaagacagtggtcacggcgacagtgaacagggtgacagtgaccatgatgctacaaatcga
gggcactcagctggtgctgacctgttctctaactgcacagaggagtgcaaggccctaggt
cactctgaccgctgctggatgccatcctttgtgccatcagatggccgccaagggccggac
taccgcagcaatctgcacgtccccggcatggatgccacgctgcctgacactgaggtaccc
tgctccgtcaacctccccgaccaactcaccatgacctcctccactgcctcctccaatgat
aggtcattctccacctttggcaaggatggccaaagatcacagtcacaccacagccttcaa
aatcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaaccaacctttctctgtgagtatcagtatgaaacttcg
cttggaccctttgacttcagtctggtccaacacagaaactaa
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integrated database retrieval system
