Cyprinodon variegatus (sheepshead minnow): 107084538
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Entry
107084538 CDS
T06110
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107084538 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107084538 (xrcc4)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107084538 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF5817_CT
DUF7783
UPF0242
Motif
Other DBs
NCBI-GeneID:
107084538
NCBI-ProteinID:
XP_015229910
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MSGTIQQISLNPGTPYFLRVDWAVDLGAGFTLALTDGSSAWIGEVSEDEVTREANDLGVI
REKYVEHLLQALTKSGEREEGRKGKVEYSFNLSPDHSLLSYQKICKNVSVHLGSVELQPA
PDPSELIREMIGKSLQHSTDLERENSNLLEANHRLRQEHQQILKELEEGVKDKEMLEKEM
YSRFVMVLNEKKAKIRGLQDTVRQLSHIDDQKRLEAVSDSEPAQSEDYSHPSQDSTVLLT
GCSLVSQGIPVDQSFSNDEDKGPQEDALYP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacaattcagcagatatctctgaatccaggcaccccctacttcctgagagtt
gactgggctgtggatcttggtgcgggcttcacactagctctcactgatggaagctcggca
tggattggagaggtttcagaggatgaggtgacaagagaagccaatgatttgggtgtcata
agagagaaatatgttgagcatcttcttcaagctctgacaaaaagcggagaaagagaagaa
ggaagaaaaggcaaagtggagtattcttttaacctgagcccagatcacagtctgctctca
tatcagaagatctgtaaaaacgtttcggtacacctgggctccgtggagctccaaccagct
ccagatccttcagagttaatccgggagatgatcggaaagtctctgcagcacagcacagat
ttggagagggaaaactcaaatctgttggaggcaaaccatagacttagacaggaacaccaa
caaatactgaaagagctggaggagggggttaaggataaggagatgttagaaaaggaaatg
tattcacgttttgtcatggtgctgaatgagaagaaagctaagatccgaggcctgcaggat
accgtccggcagctcagccacattgacgaccagaaaagactggaagccgttagtgacagc
gaaccagctcaaagtgaagattacagtcatccatcgcaggattcaacagtcctcctcaca
ggttgcagtttagtgtcacaagggatccctgttgatcaaagtttttcaaatgatgaagac
aaagggcctcaagaggatgccttatacccctag
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integrated database retrieval system
