Cyprinodon variegatus (sheepshead minnow): 107084752
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Entry
107084752 CDS
T06110
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03266
Virion - Herpesvirus
cvg04081
Hormone signaling
cvg04145
Phagosome
cvg04148
Efferocytosis
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
107084752
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
107084752
04512 ECM-receptor interaction
107084752
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107084752
04148 Efferocytosis
107084752
09144 Cellular community - eukaryotes
04510 Focal adhesion
107084752
09142 Cell motility
04820 Cytoskeleton in muscle cells
107084752
04810 Regulation of actin cytoskeleton
107084752
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107084752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107084752
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107084752
04515 Cell adhesion molecules [BR:
cvg04515
]
107084752
04090 CD molecules [BR:
cvg04090
]
107084752
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107084752
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107084752
Cell adhesion molecules [BR:
cvg04515
]
Integrins
Integrin beta subunits
107084752
CD molecules [BR:
cvg04090
]
Proteins
107084752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_integrin
Integrin_B_tail
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
107084752
NCBI-ProteinID:
XP_015230235
Ensembl:
ENSCVAG00000012166
UniProt:
A0A3Q2CW96
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MGLSSLSRCDLKDNLIKEGCKAAAIEFPSSTLTIQQDDPLSDKVSNPADVTQIRPQKLRM
TLRPGDAKRFTVSLKQVEDYPVDLYYLMDLSYSMKDDLSRLETLGNKLAETMGKTTSNLR
MGFGAFVDKITYPYLITYPPGSVENPCIGIGDQCQAQVSFKNVLSLTEKVSRFTEEVRKQ
KVSRNRDGPEGGFDAIMQAIVCKDKIGWRPDASHLLVLTTDAKTHLALDGRIAGIVQPHD
GECYLDNDNSYNKSTVLDYPSLGLLIEKMSKNNINLIFAVTEYVEPLYKQYSQVIPGTTV
GRLSQDSGNVIQLIQDAYAKIRSKVELEHLGVPDEMHLSYNATCLNGEVIRGLQSCSGLK
VGDMVSFSVEAQLRSCPIEKNRTFTIKPLGFKDSLEVTVDFACNCDCEATAVPNSPVCSD
GNGTYECGICQCHPGRLGPRCECHLDEYSPSDDANCLPKSDSPICSGRGDCLCGQCSCHS
SEFGQIWGKYCECDDFNCLRFKGALCSGNGKCSCGFCQCDAGWKGDNCNCTTRTDTCVSS
IGLLCSGRGNCVCGVCQCTQPGAYGDTCEKCPTCPDSCTIKQKCVECQHFKRGPYISDNS
CNRICNNEIVIVDKLSKKMDENSDFQEHNALNCSYKDENDCIVKFQYYEDKTGKSILYVV
KEPECPQGPDILVVLLSVAGAILLLGLVGLLIWKLLVTIKDRREFAKFEEERAKAKWDTG
NNPLYRGATSTFTNVAYRGN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggactttccagcttatctcgatgtgacctcaaagacaaccttattaaagaagggtgc
aaagcagcagctatagagtttccttccagcaccttgactattcaacaggatgatcctctt
agtgacaaggtttctaatccagcagatgtaactcaaattcggcctcagaaactccgcatg
acattaagaccgggtgatgctaaacgttttacagtcagtctaaaacaggtggaggattac
cctgtggatctctactacttgatggatctgtcatattcaatgaaagatgatctttcacgc
ttagaaactttgggcaacaagttagctgaaactatgggcaaaaccactagtaatcttcgc
atgggttttggagcatttgtggacaagatcacctacccatacctgattacttacccccca
ggttcagttgaaaacccttgcattggaataggggatcagtgccaggctcaggtcagcttt
aagaatgtgttgtcactgacggaaaaggtttctcgcttcactgaagaggtgagaaagcag
aaggtgtccagaaatagggatggtcccgaaggtggatttgatgctatcatgcaagcaatt
gtatgcaaggacaagattggatggcgcccggatgcctcacatcttctggtgctgactact
gatgccaaaactcacctcgccttagatggacgcatagctggcattgtccagccccatgat
ggagaatgttacctcgacaatgacaatagctacaacaaatcaacagttctggactatcct
tccttgggcctcttaatagaaaagatgtctaaaaacaacattaatttgatttttgctgtg
acggaatatgttgaacccctttacaagcaatatagtcaggtgattccaggcacaactgtg
ggaaggttgtctcaagactctggaaatgttattcagctgattcaggacgcctatgcgaaa
attcgttctaaagtggagctggaacatttgggagtcccagatgagatgcatctttcatat
aatgctacttgccttaatggagaggtcattcggggacttcagtcctgctctggtttgaag
gttggggacatggtgtccttcagtgtggaagctcaactgcgcagctgccctatagaaaaa
aaccgcacttttaccatcaaacctctgggctttaaggattctctagaggttacagtagac
tttgcatgtaattgtgactgtgaggccacagcagttcctaacagtccagtgtgcagtgat
ggcaatgggacctatgagtgtgggatttgccagtgtcacccgggtcgactgggtccacga
tgtgagtgccatctggatgaatatagtccgtctgacgatgccaactgcctcccaaaatca
gacagcccgatatgtagcggtagaggagactgcttatgtggacaatgctcctgtcactcc
tctgagttcggtcaaatctgggggaaatattgcgaatgtgacgatttcaactgcctgcgc
ttcaaaggagctctttgctctggcaatgggaagtgtagctgtgggttctgccagtgtgac
gctggctggaaaggagacaactgtaactgcaccacccgcacagacacctgcgtgtccagc
atagggctgctgtgcagcggccggggtaactgtgtgtgcggggtttgtcagtgcactcaa
cccggcgcctacggagacacctgtgagaagtgccccacatgccctgattcttgcactata
aagcagaagtgtgttgagtgtcagcacttcaaaagggggccgtatatcagtgacaacagc
tgcaacagaatctgcaataatgaaatagtaatagtggacaagttgagtaagaaaatggat
gagaactctgatttccaagaacacaatgccctgaactgctcctacaaagatgaaaatgac
tgcattgtgaaattccagtattatgaagataaaactgggaaatccatcttgtacgttgtg
aaagagccagagtgtccccagggccctgacatcctagtggtgcttttgtcggtggccgga
gcaattctgctcctgggtctcgtcggtctgctaatctggaagctgctggttaccataaaa
gatcgcagagagtttgccaagtttgaggaggagagagccaaagccaaatgggatacgggt
aacaatcctttgtacagaggagccacctccacttttaccaatgtggcgtacagaggaaac
taa
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