KEGG   Cyprinodon variegatus (sheepshead minnow): 107084765
Entry
107084765         CDS       T06110                                 
Name
(RefSeq) transcription elongation factor B polypeptide 2-like
  KO
K03873  elongin-B
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107084765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107084765
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107084765
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     107084765
   Cul5 complex
     107084765
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107084765
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 107084765
NCBI-ProteinID: XP_015230251
Ensembl: ENSCVAG00000011768
LinkDB
Position
Unknown
AA seq 141 aa
MSVTSRLSLWGSFFFVSRQPQEMDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRP
PEDQRLYKDDVLLNDSQTLGNCGFTNQTARPQAPATVGLAFRIGDDSFEPLRVESFSTPP
ELPDVMKPQDSGSTANEQAVQ
NT seq 426 nt   +upstreamnt  +downstreamnt
atgtctgtgacatcacgattatcgttgtggggaagttttttttttgtgagcaggcaaccg
caagaaatggatgtgtttttaatgatccgacgtcacaagacgactatctttacggatgcg
aaagagtctactacagtctacgaactaaagcgcattgttgaaggcattttaaagcggccg
cctgaagatcaaaggctctacaaggatgatgtgctgcttaatgacagtcagactctgggg
aattgtggcttcacaaatcaaacagccagacctcaggctccagccacagtgggattagct
tttcgtatcggcgatgattcatttgagccactgagggttgagtccttctccactccccca
gaacttcctgatgtcatgaagcctcaggattctggaagcacagccaacgaacaggcagta
cagtga

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