Cyprinodon variegatus (sheepshead minnow): 107084925
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Entry
107084925 CDS
T06110
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107084925 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107084925 (vps45)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107084925 (vps45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
NLRC4_HD
Motif
Other DBs
NCBI-GeneID:
107084925
NCBI-ProteinID:
XP_015230491
Ensembl:
ENSCVAG00000002256
UniProt:
A0A3Q2DM22
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MNVTLAVKQYISKMIESSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DSMKHLKAICFLRPTKENVQHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRRRTDQVISGRNRSPGRSWEPSMLSRCTQGLTSVL
LALKKCPMIRYQLSSDMARRLAESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPL
LNQWTYQAMVHEMLGLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTN
IKNLMEDFQKKKPKGQQKLESIADMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVAERQ
LMEVSEVEQELACQNDHSSAQQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILTSL
IEELSRRGVSERYRRMVQSVVEYGGKRIRGSDLITPTDAVAITKQFFKGLKGVENVYTQH
QPLLHETLDQLIKGRLKDSQFPYLGASSLRDRPQDIMVFLIGGATYEEALTVYNLNRNTP
GVRIVLGGSAIHNTKSFLEEVMLATGHSGDRAQGSARHSTRR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgctcgcggtgaagcagtacatctccaagatgatcgagagcagtgggccc
ggaatgaaggttctgctcatggacaaagagacgaccagcatagtcagcgtggtgtacacc
cagtctgagatcctgcagaaggaagtttacctgttcgaacgtattgactctcagaacaga
gacagcatgaagcacctgaaggccatctgcttccttcgtccaactaaggaaaatgtgcag
catctaattcaggaactgagaagaccaaagtacagtgtctacttcatatacttcagtaat
gtgatcagtaagagtgagatcaaagctctggctgaggcagacgaacaggaggtggtggct
gaagtccaggagttttatggagacttcatcgctgtgaatcctcacctgttttccctaaac
ctgcagggtgtctctcggagacgcacagatcaggttatttccggccgaaaccgttctccg
ggtcggagctgggaaccctccatgttgtcccgctgcactcagggtttgacctccgtcctg
ctcgccctgaagaaatgtccaatgatccgctaccagctgtcctctgacatggccagacgt
cttgcagaaagtgtcaagcaaatcatcactaaggagtacgagctgtttgacttcaggaag
actgaagttcctcctctgctgttgatccttgaccgcagcgacgacgccatcacgcctctg
ctcaaccagtggacgtatcaggcgatggtccacgagatgctcggtctgaacaacaaccgg
atcgacctttccagagtcccaggaatcagcaaagacctgagggaggtggtgctgtcagcg
gaaaatgatgagttttatgctaataacctctacctgaattttggggaaattggaaccaac
attaaaaacttgatggaagatttccagaagaagaaacctaaaggacagcagaagctggag
tccattgctgacatgaaggcgtttgtggataactacccccaatttaagaagatgtcagga
accgtttccaagcatgtgacggtggtaggggagctgtcccggctggtggcagagcggcag
ctgatggaggtgtcagaggtggagcaggagctggcctgtcagaatgatcactctagcgct
cagcagaatgtgcgaaggctactgcagaatcctcgtgtctcagagctggacgcggtccgt
ctcgtcatgctctatgctttgagatatgagcgccacagcagcagcatcctgacatcttta
atagaggagctgagcaggaggggagtgtctgaacgttaccgcaggatggttcagtcggtt
gtggagtacggtgggaagagaatcagaggaagtgacctcatcacacccacagatgctgtt
gctatcaccaaacagttcttcaaaggacttaagggtgtagaaaacgtgtatacacaacat
cagcctctgctgcatgaaactctggatcagctgattaaaggtcgactcaaagacagtcag
ttcccatacctgggggccagcagcctcagagacaggcctcaagacattatggtgttcctg
atcggtggagccacatatgaagaagctttgactgtttacaacctgaaccgtaataccccc
ggggttcggatcgtcctgggaggaagtgcaatccacaacactaagagtttcctagaagag
gtgatgttggcgacgggtcacagtggcgatagagcgcagggaagtgctcgccattccacc
aggcgatga
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