KEGG   Cyprinodon variegatus (sheepshead minnow): 107085012
Entry
107085012         CDS       T06110                                 
Symbol
wdr24
Name
(RefSeq) WD repeat-containing protein 24
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    107085012 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107085012 (wdr24)
Membrane trafficking [BR:cvg04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107085012 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_HPS5 zf-RING_16 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 107085012
NCBI-ProteinID: XP_015230613
Ensembl: ENSCVAG00000001805
UniProt: A0A3Q2C871
LinkDB
Position
Unknown
AA seq 787 aa
MEKMSRVTTALGSNSITGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKFHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPHYLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLMGDLAFAVNESLI
SSDASRKPYPGGDRRYPFFSFKKANPTEQFAHVSSTLSVFETDLDSNCMDWFVKTAQLYL
LSGKPFTELCDHNAKVAQELKRPQVSTTWTMLRIMFSEPAPGPNQNLSKLGSLPLMNSFS
MKDLGSVMGPEGRLERHKGESRQDNIHLEPGNSHISNNNEENEETEGSDGPTEYMFGDAE
LDDDDLYPMEHENQAVPEEQVYTLPPEAFQLRHEIIDNPSAPEHLQQDKADSPHVSGNEA
EVTCLTPIETVSLISISQPLYSPHLHGSFFCPIVREMLSHYAEQGDVQMAVSVLIVLGER
IRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHINCSNCK
RPMSNKGWICDRCRQCASACAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKNNSHCPAGC
GHMCEYT
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggagaaaatgtcacgggtcaccacagccctcggcagcaacagcatcaccggccgaaca
atgttctgccacctggatgctccggccaatgccatcagcgtgtgccgggacgccacccag
gtggttgtcgccggacgcaacatctttaagatctatgccctcgaggaggagcagttcgtc
gagaagctgaatctgcgcgtcggccgcaaaccgtccctgaacttcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaatggggccgtggtc
acctggaatctggggaaaccttcccgcaacaagcaggaccagctgttcactgagcacaaa
cgaaccgtcaataaggtgtgcttccacccaacagaggtttacatgctgctgagtggatcg
caggatggcttcatgaagtgctttgatctgcgcaaaaaggagtctgttagtactttctca
ggtcagtcagagagtgtgagggacgtccagttcagcatgaaggattatttcacattcgct
gcttcctttgaaaatggtaacgtccagctgtgggacattaggcggccagatcggtacgag
aggatgttcacggcgcataccggtcccgtgttctgctgcgactggcaccctgatgacagg
ggttggctggccacaggaggcagagacaagatggtgaaggtgtgggacatgacaacaaac
agggccaaggagatctactgcgtccaaacaatcgcgtcagttgctcgagttaaatggcgc
ccagagaggaagtttcacttagccacatgttccatgatggtggaccacaacatctacgtg
tgggatatccggcgacctttcatcccattcgctaccttcgaggaacataaagatgtgacc
actgggatagtgtggcgccaccaacacgaccctcactatctgctctcgggctccaaagac
agcactctctaccagcacatgtttaaagacgcaacacgccccgtggacaaggccaaccct
gagggtctgtgcttcggactgatgggcgacttggcctttgctgtcaacgagagtctgatc
agcagcgacgccagcaggaagccctaccctggaggagaccgccgttaccccttcttctcg
tttaagaaggccaaccccactgagcagtttgctcacgtgtccagcactcttagcgtcttt
gagacggacttggacagtaattgcatggactggtttgtaaaaacagcccaactctacctc
ctcagtggaaagccgtttactgagctgtgcgaccataatgccaaggtagcgcaggagctc
aaaagaccccaggtttccacgacgtggaccatgctgagaatcatgttctctgaaccggca
cccggtccaaatcagaacctcagcaaactcggcagcctgccgctaatgaacagtttcagc
atgaaagacttgggttcagtgatgggtccggagggcagactggagcgccacaaaggtgaa
agccggcaggataacatccacctggagccggggaattcgcacatcagcaacaataacgaa
gaaaatgaggagacggagggaagcgacggccctacagagtacatgtttggtgacgcagag
ttggatgacgatgatctgtatccaatggagcatgaaaaccaagcagtgccagaggagcag
gtgtacacactacctccggaagccttccagctgcgccacgagatcattgataacccgtct
gcgccagagcatcttcagcaggacaaggccgactccccgcatgtcagcgggaacgaggcg
gaggtcacctgcttgacacccattgagacggtctcgctcatctccatctctcagcctctg
tacagcccacatttacacggcagctttttctgccccatcgtgagggagatgctgagccac
tacgccgagcagggcgacgtgcagatggccgtgtctgtgctcatcgtgttgggggagagg
attcgcaaggagatcgacgacctcacccaggagcactggtacatgtcctacatagacctg
ctgcaacgattcgagctgtggaacgtgtccaacgaggtcatcaagctgagtacatgcagc
gccatcacctgcctgaaccagacgtccaccactctgcacatcaactgcagcaactgcaaa
cggccgatgagcaacaaagggtggatctgtgacaggtgtcgccagtgtgccagtgcctgt
gcggtgtgccaccatgtggtgaaggggctctttgtttggtgtcagggctgcagccacggt
ggacacctagagcacatcatgaactggctaaaaaacaactcccactgccctgcaggatgt
ggtcacatgtgtgaatacacatga

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