Cyprinodon variegatus (sheepshead minnow): 107085093
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Entry
107085093 CDS
T06110
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107085093 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107085093 (smarcd2)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107085093 (smarcd2)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107085093 (smarcd2)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107085093 (smarcd2)
PBAF complex
107085093 (smarcd2)
GBAF(ncBAF) complex
107085093 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
107085093
NCBI-ProteinID:
XP_015230731
Ensembl:
ENSCVAG00000020725
UniProt:
A0A3Q2GQ17
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MTSRGGFPAPQLNPTVSPMSVGHVGAMRMPGMPQLPAGYSRSMSSNPQYHQRSGMLPSRV
GGLLGSMGGQMPGPSYGSGSIPMRPGISHPSMDPSRKRFLHHQQQQQETLGGMRRGAKRR
KMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTYTPSKPEGEESEKVSSWELRVEGKLLEEPGKQKKKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAN
IMQALWIYIKNNKLQDGHEKEYINCNRYFRQIFGCQRMKFSEIPMKLAGLLHHPDPIIIN
HIISVDPTDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIEYINQL
KTERDFMLSFSNNPQEFIKDWLKSQCRDLKLMTDVTGNPEEERRTEFYQAPWVPEAVGRY
VYSKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagagggggcttccctgctcctcagttgaatcccaccgtgagccccatgagt
gtcggtcatgtcggggccatgaggatgcccgggatgccacagcttcccgcgggttactcc
cgcagcatgagcagcaacccccagtaccaccagcggtccgggatgctgcccagcagagtg
gggggtctcctagggtcgatggggggtcagatgccaggtccttcgtacggtagtggcagt
attcctatgcggccaggcataagccatcccagcatggatccttccaggaagcgcttcctt
catcatcagcagcagcagcaggagacgcttggaggcatgagaagaggagcaaaacgacgc
aaaatggctgacaaggttcttccacagaggatacgagacctggtcccagagtctcaggcc
tacatggatcttctggcctttgagaggaagctggatcagaccatcgctcgaaaacggatg
gagattcaggaggccatcaaaaagcccatcatgcaaaagcgtaaactccggatctacatt
tctaacacttacactcccagcaagcctgagggagaggaatctgagaaagtgtcctcctgg
gagctgagagtggaaggcaaactcttggaggaacctggtaagcagaagaagaagttctcc
tctttcttcaaaagtctcgtgattgagctcgataaggagctttatggacccgacaatcac
ctagtagagtggcacaggatgcccaccactcaggagacagatggtttccaggtcaaaagg
cctggagatgtgaatgtcaaatgcactcttctgctcatgcttgaccatcagcctccgcag
tataaactggaccctcgtttggctcgtctccttggcgtgcacacgcagactcgggccaac
atcatgcaagctctctggatctacatcaagaacaacaagttgcaggacggtcatgagaag
gagtacatcaactgcaatcgctacttcagacagatctttggctgtcaacgcatgaagttc
tctgagattccaatgaagctggcgggcctgctgcatcaccctgaccccatcatcatcaat
cacatcatcagtgtggaccccacagaccagaagaagacggcttgttatgatattgatgtg
gaagtagacgaccctctgaaagcccagatgaacagctttctgtcctccaccaccaaccaa
caggaaattgccgctctagaaatgaagattcatgaaacaatagagtacattaaccagctt
aaaacagagagagactttatgctgagcttcagcaataatcctcaagagttcatcaaggac
tggctcaagtctcagtgccgagatctgaagttgatgacagatgtaacgggaaacccagag
gaagagcgcaggacagagttttatcaggcaccatgggttccagaagcagtgggtcgatat
gtttattccaaagtgcagcagaggagacaagagttggagcaagtgttgggcatccgacta
acctaa
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integrated database retrieval system
