Cyprinodon variegatus (sheepshead minnow): 107085108
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Entry
107085108 CDS
T06110
Symbol
sox13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107085108 (sox13)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107085108 (sox13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDE_N
Motif
Other DBs
NCBI-GeneID:
107085108
NCBI-ProteinID:
XP_015230751
Ensembl:
ENSCVAG00000020115
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MTCVSRTVPGSERFWIPALPAGPTRMVEPSPSALHLLSSGDAHMAEIGVKVEQEECNGGG
GAKTSSERPGTLQEWSANQSLEARQLTPPLSRSPSEGSPGKELPHKQSPLGGKEAGIHEQ
SEAQSKIKEVMPNFEKLLKTDWKEKLLDKSTEGAGQLRGTPESLAEKELQLLMMINQLSG
LREQLLNAHSEQRNMAALLLEKQQQQMEVARRQQEEIAKQQELLIKQQRTINQLQQQIQV
NMPFLMIPAFHPNSQPLPVTSESQMTYPVQPIPCKPAVDYPIQLLQSSHPASIKRSTTSF
RQEASQPLNLTSKPKGMEVGKTSSPQSLELGSLGLQGGYRFRDLHREASHSPPRPTLSFL
GEGDVVTQAIHDAQQLLRSHSRGEKERDGAVKMEYKSSPRTEKMTHCEREDRHGLQSTED
HLSSDSEAS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgtcagcagaactgttccaggcagtgagcgattttggattcctgcacttcca
gccggcccgaccagaatggttgagcccagcccttcagctctgcacctcctctccagtggg
gatgcacacatggcagaaatcggtgttaaagtcgaacaggaggaatgcaacggaggaggc
ggagccaaaaccagttcagagcgcccggggactttgcaggagtggtcagccaaccagtct
ctagaggcgcgtcaactgaccccaccgctgtcacgctccccttcagagggttccccagga
aaggagttaccccacaagcagagccccttgggagggaaggaagctgggattcatgagcaa
tcagaggcccaatcaaaaatcaaggaagtaatgccaaactttgagaagctgctgaaaacc
gactggaaggagaagcttctggataaaagcacagaaggagcaggacaactgagaggaacc
cctgagtctctggcggagaaggagctccagctgttgatgatgataaaccagctgagcggc
ttgagagagcagctgctcaacgcccattcagaacagaggaacatggctgccctgctgctg
gagaagcagcagcagcagatggaggtggcccggcggcagcaggaagagatcgccaagcag
caggagctgctcatcaagcagcagcgaaccatcaaccagcttcagcagcagatccaggta
aacatgcccttcctgatgatcccagctttccacccaaactcccagccgctccctgtcacc
tctgaatctcagatgacatatccggtgcagccgatcccgtgcaagcccgcggtggactat
cccatccagctgctgcagagcagtcaccccgcctccatcaagaggagcaccacctccttc
aggcaggaggccagccagcctttgaacctgacctccaagcctaaggggatggaagtgggg
aagacatccagcccacagagcctggagctgggatcactggggctgcaggggggctacaga
ttcagagatctccacagagaggcgtcccacagccccccacggcccaccctcagtttcctg
ggagaaggtgacgtggtcactcaggccatccacgatgcccagcagctgctgaggagtcac
agcaggggggagaaggagcgggacggggccgtgaaaatggaatataaaagttctcctcgt
acagagaaaatgactcactgtgaacgagaagacagacacggcctgcagagcacggaggac
cacctcagcagcgactcagaggcctcttag
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integrated database retrieval system
