Cyprinodon variegatus (sheepshead minnow): 107085120
Help
Entry
107085120 CDS
T06110
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107085120 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107085120 (snrpe)
03041 Spliceosome [BR:
cvg03041
]
107085120 (snrpe)
03032 DNA replication proteins [BR:
cvg03032
]
107085120 (snrpe)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107085120 (snrpe)
Spliceosome [BR:
cvg03041
]
Complex A
U1 snRNP components
Sm proteins
107085120 (snrpe)
U2 snRNP components
107085120 (snrpe)
Complex B
U1 snRNP components
107085120 (snrpe)
U4/U6.U5 tri-snRNP components
107085120 (snrpe)
Complex C
U2 snRNP components
107085120 (snrpe)
DNA replication proteins [BR:
cvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107085120 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
107085120
NCBI-ProteinID:
XP_015230765
Ensembl:
ENSCVAG00000020150
UniProt:
A0A3Q2EF08
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHMKTKNRKPLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggtccagaaggttatggtccagcccattaacctt
attttcagataccttcagaatcgctccagaatccaggtgtggctgtatgagcaggtcaac
atgcggatagagggatgtattattggctttgatgagtacatgaacctggttctagacgac
gctgaagaaatccacatgaaaaccaagaacaggaagccgctcgggaggatcatgttgaaa
ggagacaacataacgctgctgcagagcgtgtccaactag
DBGET
integrated database retrieval system
