Cyprinodon variegatus (sheepshead minnow): 107085123
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Entry
107085123 CDS
T06110
Symbol
stag1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107085123 (stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107085123 (stag1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107085123 (stag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
DUF2785
Motif
Other DBs
NCBI-GeneID:
107085123
NCBI-ProteinID:
XP_015230778
Ensembl:
ENSCVAG00000019455
UniProt:
A0A3Q2DCT2
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGATDTVSLSMNITEMEDPEIKGKKKRGRPGKQTQTSNKKPRKSP
TDKTLSMARGRGKANGVAQQNGNGGEPVTLFEVVKLGKSAMQSVVDEWIEAYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEMLSDRQESALIELTVCTLRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADAEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGVPSKDDLLALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLITGGREGLQPLVFNPDSTLQNELLNFVLDHV
FIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGSEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKKRIEEESSVEGSWMMRNDTLQTPSALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDYVHNPQMQMSWLGQQKMEEVNRKDRTSMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagcttcctgtcctacaggactcctccaatgagtctggggcaacagac
actgtgagcttaagcatgaacataacagagatggaagatccagagatcaaaggcaagaag
aagagggggaggcctggaaaacagacacagacgtccaataagaagccccggaagtctccg
acagacaagactctgagcatggccagaggaagggggaaagcaaatggcgtggctcagcaa
aatggaaacggaggagagcccgtgactctgtttgaagttgtcaaactgggaaagagtgca
atgcagtctgtggttgatgagtggatcgaggcatacaagcaagatcgagacttggccctg
ctggatctcattaactttttcatccagtgctccggctgcaaaggcactgtgaggatagag
atgttcaggaacatgcagaatgcagagatcatccgcaagatgacggaggagtttgatgag
gacagcggggattatcctctaacgatgcccggcccaatgtggaaaaagtttcgctacaac
ttctgcgagtttatcggcgttttgatccgtcagtgtcagtacagcatcatctacgacgaa
tacatgatggacacagtcatttccctccttactggactgtcggactcccaagtacgagcc
ttcaggcacacctccacattagcagcaatgaagctgatgacggcgctggttaatgtggca
ctgaacctgagcattcatcaggacaacacccagagacaatacgaggctgagaggaacaag
atcgctggcaaacgagccaatgagaagctggaactgctgctgcaaaagaggaaggagctt
caagagaatcaagatgaaatagaaaatatgatgaactccatctttaagggtatcttcgtg
catcgctacagggatgctattgctgagataagagccatttgcatcgaggagattggagtg
tggatgaagatgtacagcgatgcattccttaatgacagctaccttaaatatgttggttgg
actttacatgataggcaaggagaggtgcgtctgaaatgcctgaaggctctgcagaacctt
tacacaaacagagagctgttccccaagctcgagctttttaccaaccgctttaaggatcga
attgtctcgatgacactggataaagagtatgatgtggctgttgaggccatcagactggtt
accctcattctgcagggcagtgaagacgccttgtcaaacgaggactgtgagaacgtttac
cacctggtttactctgctcaccgacctgtagcagttgctgcaggagagtttcttcataga
aagttgttcagtcgccatgacccgcaggctgaggaagccctggctaaacggagaggcagg
agcagtcccaatgggaatctcatccggatgcttgttctctttttcttggagagcgagctt
catgagcatgcagcatacctggtcgactcgctgtgggagagttctcaagagctgctgaaa
gactgggaatgcatgactgaacttctgctggaggagcccgttcagggagaagagatgttg
tcagacagacaggagagtgctttgatagagttgacggtgtgcaccctccgacaggcggcc
gaggcacacccacctgttggcagaggcactggcaaacgagtcctgactgctaaggagagg
aagacccaaatagacgataagaataaactcactgaacatttcatcatggctcttcctatg
ttattatctaagtaccaggcagatgcagagaaggtagcaaatctacttcagatcccgcag
ttctttgacctggatgtatacagtgccgggcgcatggagaagcatctggatgccttattg
aagcagatccggttagtggtggagaaacacattgagacggacgtgctggaagcctgcagt
aaaacctacagcatcctgtgctctgaggagtacaccatcatgaaccgcgtagacatcgct
cgctcacagctcatcgatgagatgaccgaccgatttgcacactcggttgaagagctgctg
caggagggtgaagaagccgacgatgacgacatctacaacgttctgtctactcttaagcgt
ctcacagctttccataatgctcatgacctaacaaggtgggatctgtttgggaattgttac
cggctgctgaaggcgggcatagagcagggctccatgccagagcagattgctgtgcaggcc
ctgcagtgctctcactactccatcctgtggcagctggtgaagatcacggagggggttccc
agcaaggatgacctcttagctctcaggagggtggtgaagtctttcctcgctgtatgccag
cagtgtctgtccaacgtcaacacaccagttaaagagcaggcgtttatgcttctatgtgac
ctgctgatgatcttcagccaccagttaattacgggaggcagagaaggtcttcagccgctg
gtgttcaacccagacagtactctgcaaaacgagctgctaaactttgtcctggatcatgtc
ttcatcgatcaggatgatgaaaatcagagcatggagggagacgaggaggacgaggccaac
aagattgaagctctgcacaaaaggagaaatctgctcgcagctttctgcaaactcatcatc
tatgacatcgtagacatgcctgctgctgctgatatctttaaacactacatgaagtactac
aacgattatggtgacatcatcaaggaaacactcagcaaaacaagacagacagacaagatt
ctctgtgcaaaaacactcatactcagtctgcagcagctattcaatgagctcctgcaggat
cagggtcccaatctggatcgaacatcgtcacatgttagcggcatcaaggagctggctcgc
cgcttcgctctgacctttggtttggatcagatcaagaccagagaggctgttgcaacgcta
cacaaggatggaatagagtttgcatttaagtatcaaaaccctcgaggatcagagtttcct
cccatcaatctggccttcctggaggtcctgagtgaattctcctccaaactaatacggcaa
gacaaaaagacggttcactcgtacctggaaaagttcatgtctgagtcgatgtcggaacgc
cgggaggacgtgtggctgccgctgatctcttacaggaacagtctgctgaccggcggagac
gaggaccacatgtccgtcacatcaggctccagcagcaagacaggctctgtgcgcagcaag
aagggacgtccgccgctgcacaagaaacgcattgaggaggagagcagcgtggagggctca
tggatgatgagaaacgacacacttcagacgccgagtgcgctccagactcctcagctcacc
tcaacggttctcagagaaaacagacctgcagaacacatgcctgatccggactcagaacca
ggatcggagaacgactacgtccacaatcctcagatgcagatgtcttggctcggccaacag
aagatggaggaggtgaacaggaaagaccgaacgagcatgaactacatcaagtcacgcagc
aaccagggcgtccggcagactgtccgcggtttgatggaggacgacgcagagcccatcttt
gaagacgtgatgatgtcatcgcggggccagctggaagacatgaacgaggagtttgaagat
accatggtgatcgacctgccaccgtcgaggaacagacgggaaagagcagaattaagacca
gacttctttgactctgcagcgatgatagaagacgagtcgggattcagcatgcccatgttc
tga
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