Cyprinodon variegatus (sheepshead minnow): 107085228
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Entry
107085228 CDS
T06110
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107085228 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107085228 (poln)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107085228 (poln)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
107085228 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
107085228
NCBI-ProteinID:
XP_015230931
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MRFNPAKDVSKGFHEVVTTTEPQIHPRSSLPPAARPSDARIKDSGRLNQEEREQMLEELS
RAEVVVLTLMFQDGTTQLDPEQKLAPAVCGLLVLMKTDLRCTTPRCSLGLNDSLVYFKLE
RNPPWAQQRIQLAQQLFTRAMLLRVLSRSGLVICYKAKDFLRTVLLFYKHDLSWKEVAGC
QIQDPQVSGWLLDPSDPSSCFNDLLLKHCKNSCATSLGSDKTKMKQLEQEAHKAAGQIFL
VNSNAQLRTVLFEKLRLHERCRNKKLPKTINKQQQSTSEAALLQLQDLHPLPKIILEYRQ
VHKIKSTFVDGILSCMKSKNYISSTWCQTSAVTGRISAKHPNFQALPRQPLQISRKQYIQ
GKQEEVVAVHPRDLFIPQDGWTFLSADFCQVELRLLAHFSSDPELLHIFTNPQSDAFTML
ASQWKGKSVDEVTPEDREHAKRVVYSVVYGAGRERLSGILGVSSEQARHFQDSFLRTYGD
VQAFIQRTIQQSHKQGYVVSLMGRRRNLPNINSPDWGVRMQAERQAVNFVVQGSAADLCK
MAMISIFNQVSSSCSLSARLLAQLHDELLYEVEDSQVEEFAALVRSTMESLQDIHHLGVH
LKVPLKVAVSIGKSWGSMSELHTPPSVSQTPSSSSPSPAPP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaatccagcaaaagatgtttcaaaaggttttcatgaggtcgttaccacgact
gagccacaaattcatcccagaagcagcctaccacctgcagcccggccatccgatgccagg
ataaaggattctgggaggctgaatcaggaggagagggagcagatgctagaggagctgtcc
cgtgctgaggtggtggtgctaacactgatgtttcaggatggaacaactcagttggaccct
gaacagaagctggctccagcagtgtgtggcctccttgtgctgatgaagactgatcttcgc
tgcaccacacctcgttgttctcttggtctgaatgacagcttggtctactttaaactagag
cgcaaccctccatgggcacagcagaggattcagctcgctcagcagctcttcaccagggct
atgcttctacgggtattgtcaaggtctggacttgtgatttgttataaagccaaggatttc
cttcgaacagttttgctgttttacaaacatgatctcagctggaaggaagtggcaggctgt
cagatccaggatccacaggtttctggttggttgctggatccttctgatccctcctcctgc
ttcaatgatctgctacttaaacactgcaaaaactcttgtgcaacatctctgggttctgac
aagactaaaatgaaacagctggagcaggaggcccacaaagcagctgggcaaatcttcttg
gttaacagcaacgctcagctacgaacagtgctgtttgagaagctgcgtttacatgagcgc
tgcagaaacaagaagctccccaagactatcaacaaacaacagcagtcaacatcggaggct
gcgttgctgcagcttcaggacctacatcctcttccaaagatcattctggagtacagacag
gttcacaaaatcaagtcaacgtttgttgatgggattctgtcatgcatgaagagcaagaac
tacatttcttctacatggtgccagacgagtgctgtgactgggagaatctcggccaaacat
cccaactttcaagccctcccgaggcagccacttcaaatcagcaggaaacagtacatccaa
ggaaagcaagaggaggttgtggctgtccatcctcgggacttgtttattcctcaggacggc
tggacgtttctttctgcagacttttgccaggtggagctccgcttgctggctcacttctcc
tccgaccctgagcttctccacatttttaccaacccgcagtccgacgccttcaccatgctg
gcctctcagtggaaagggaagagtgtggatgaggtgaccccggaagatcgagaacatgcc
aagcgggttgtctattcagtggtttatggagcaggtcgtgaacgtttgtcagggatatta
ggggtgagctctgagcaggctcgtcatttccaggacagtttcctccggacctacggggac
gtccaggccttcatccagagaaccatccagcagagccacaaacaaggctatgtggtgtct
ttaatgggccgaagacgtaacctccccaacatcaactccccagactggggggtccgcatg
caggctgaaagacaggctgtcaactttgtggttcagggttcagcagctgatctctgtaag
atggctatgatctcaatctttaaccaggtctcctcctcctgctcgctctctgccaggctt
ttagcacagcttcatgatgagcttctttatgaagtggaagactctcaggtggaggagttt
gcagctttggtgagaagcaccatggagtctcttcaggacatccaccatctaggagttcat
ctaaaagtgcccctgaaggtggcagtctccattggcaagtcctggggatccatgtcggag
cttcacactccaccgtctgtctcccaaactccatcttcctcctccccctctcccgctcca
ccatga
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