Cyprinodon variegatus (sheepshead minnow): 107085252
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Entry
107085252 CDS
T06110
Name
(RefSeq) RNA-binding protein 4-like
KO
K13189
RNA-binding protein 14
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107085252
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107085252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
DbpA
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
107085252
NCBI-ProteinID:
XP_015230968
Ensembl:
ENSCVAG00000013776
UniProt:
A0A3Q2CZJ6
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MDKSHTVKLFVGNLALDTTQEELSAIFEPYGQVVSCSVLRQFAFVHLQGEGAADRAIREL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLKQLFQTFGKVLECDKVKGYAF
VHMENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVNCGKQGHYAGECP
VGKPSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTGITTGTRT
DGNPVNPAVYGALASQVYGANVANQLYGSVANQAALTSGATQMYGSVGPNIYGQVAASPA
AAAAAAAAAAYTTPVYTPTVANHHLYLAAAPGIEMQAAASVNPAYSVASAIYGAPAPAYA
HIGTMGAADPTAALFEAARQAHYFAQGQQVVADQQSAAVAAAVAKSGERDRSPLRRSAPL
LPDPVMKPFIYQRAKPRRPLLPTPAGRAAEEAAEAAEDPMARYYAEYYQQLQQYPQFQYA
YPSSTVAAIAGMQGVPAMSAQPVATLEALRPVVPTAAAVAAAMAAPRVYEPPLPPPTRKE
AILHRPELSLHTPEPPFR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagccacacagtgaagctctttgtgggaaacctggctctggacaccacccag
gaagagctgtcagccatttttgaaccttatggccaggtcgtcagctgcagcgtgctgcgg
cagttcgcctttgttcatctacagggcgagggggctgcagatcgagccattcgggagctc
aatgggagagagttcaggggacgaaatctggtggtggaggagtccagggggaggccgttg
cactccaccaaggtgtttgttggtaatttgagtgggatgtgcaccactgaagacttaaag
cagctgttccagacatttgggaaggttcttgagtgtgacaaggtcaaaggctacgccttc
gttcacatggagaataaggaagatgctcttcaggcaatcgaggctttgcacggtacgtcg
tttaaaggccggccgctgtccgtagagctatcaaaggtccagcccagcaagcagacaccc
actgggaagatcccatgtgttaactgcgggaagcagggccactatgctggagaatgtcct
gtggggaagccgtctttagagcagtaccagagtcaggccgcggtcttggctgctgctgcg
gctgcagccgccggcctgcctctgcaggtccaacagagcgtgcacaattcagtctacaac
acctccaccttcgaccccacttatgcagctctcaccggcatcaccacaggcacacgcact
gacggaaacccggtgaatccagccgtgtatggtgccctcgccagccaggtgtatggtgct
aatgttgccaatcaactatatgggagtgtggcaaaccaggcagctttgacatcaggtgcc
acacagatgtacggctcggtggggcctaatatctacggccaggtggccgcatcgcctgca
gctgctgctgccgcggcagcggccgctgcttacacaactccagtttacaccccgactgtc
gccaaccatcatttgtacctggcagctgctcctggaatagagatgcaagcagccgcttcg
gtgaaccccgcttactctgtagcttcggccatttacggcgctcccgcaccggcctacgct
cacatcggcaccatgggagcagcagatcccaccgcagccctgtttgaggctgccaggcag
gctcattacttcgcccagggtcagcaggtcgtggctgaccagcagtcggccgccgtggcg
gcagctgtggccaagtctggagaaagagaccgcagtcccttacgccggtcggcacctctt
ctgccggaccctgtgatgaagccgtttatataccagagggccaaaccgcgcagacctttg
ctcccaacaccagctggccgtgcagcggaggaggcggcagaggcagcagaggacccgatg
gccaggtactacgccgagtactaccagcagctgcagcagtaccctcagttccagtacgcc
tacccgtcgagcacagtggcagccatcgccggcatgcagggagtccccgccatgtctgcc
cagccagtcgctacgctggaagccctcaggccagtggtccccaccgccgctgctgtggca
gctgccatggctgcgcccagggtgtatgagccgccgttgccgccgcctacacgcaaggag
gccatcctccaccgccccgaactctcccttcacacgcctgagccccccttccgatag
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