KEGG   Cyprinodon variegatus (sheepshead minnow): 107085289
Entry
107085289         CDS       T06110                                 
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
  KO
K04497  groucho
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04310  Wnt signaling pathway
cvg04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    107085289
   04330 Notch signaling pathway
    107085289
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cvg04812]
    107085289
Cytoskeleton proteins [BR:cvg04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    ADF / Cofilin
     SCMC complex
      107085289
SSDB
Motif
Pfam: TLE_N WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WD40_RFWD3 HALZ Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 107085289
NCBI-ProteinID: XP_015231026
Ensembl: ENSCVAG00000012430
LinkDB
Position
Unknown
AA seq 772 aa
MIRDLSKMYPPARHPVPHQPGQPFKFTVTESCDRIKEEFQFLQAQYHSLKLECEKLASEK
TEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQV
TMAELNAIIGQQQLQAQHLSHGHAIPVPLTPHPAGLQPPLPPGASTASLLALSSALSHQL
PLKDERKHHENNGEHTRDRDSVKRSSVSPSASFRAGEKHQSSSDFSSDSKKQKTDDKELT
STRYESDGEKSDDNLVVDVSNEDPTSPRGSPAHSPRENGLDKSRLLKKDAPLSPSSIASS
SSTPSSKSKEINLNEKSTTPVSKSSTPTSRSEAPTPSSTSTPGLRPAPSKPTGAELLASG
LRTPLAVPCSYPGPFGMVPHPGMNGELSGAGAVYTGLHNISPQMSAVAAAAVAAYGRTQV
VGFDPHHHIRVPGLPPNLSGISGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQI
NTLSHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKTPVSQLDCLNRDNYIRSCRL
LPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI
AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS
QIFSLGYCPTGDWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLRFAHCGKWFVSTGK
DNLLNAWRTPYGASIFQSKESSSVLSCDISIDDKYIVTGSGDKKATVYEVIY
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgattcgagatctaagcaagatgtacccgccggcacggcatccggtgccacaccagccg
gggcagccgttcaagttcaccgtcaccgagtcctgtgatcggatcaaagaggaatttcag
ttcctgcaagcccaatatcacagtctaaagttggaatgtgaaaaactggccagtgagaag
actgagatgcaaagacattatgtaatgtactatgaaatgtcatatgggttgaacatagag
atgcataaacaggcagagatcgtcaagcgcctgaatgcaatctgcgcccaagtcatccct
ttcctctctcaagagcatcaacagcaggtggtgcaggcggttgaaagagcgaagcaggtc
accatggctgaactcaacgccattataggacagcagcagctccaggctcagcacctctcc
catggtcatgccattccagtcccgctcaccccccatccagcaggtctgcagccccctctg
cccccgggtgccagtactgccagcctgctggctctatcatcagcactgagtcaccagctg
ccacttaaggatgagaggaaacaccatgagaacaacggagaacatacaagagacagagac
tcagttaagagatcctctgtgtctccgtcagccagtttccgggccggagagaaacatcag
agttccagtgatttttcatctgacagcaaaaagcagaagacagatgacaaagagctaacc
tcgacccgctacgaaagtgatggagaaaagagtgacgacaacttggtggtggacgtctcc
aatgaggatcctacgtctcctcgaggaagccctgcccactctcctcgggagaacggattg
gacaaaagtcgcctgctaaagaaagacgcccccctgagtccttcttccatcgcctcctcc
agcagcacaccttcatccaagtccaaagagattaatttgaatgaaaaatcgacaacgcct
gtgtctaagtccagcaccccaacatcccgttctgaggcccccacacctagcagcacctcc
acccctggcctgaggcctgcgccgagcaaacccacaggagctgagctgcttgcttccggt
cttcgcacaccgcttgcagtgccctgctcttaccctggaccgtttggaatggtgcctcat
cccggcatgaatggagagctgagtggagcaggcgccgtctataccggcctgcataacatc
tccccacagatgagcgcagtggctgctgctgctgtggcggcatacggacgcacacaagtg
gtgggatttgatcctcaccatcatatccgagtcccaggccttccccccaacctgtcagga
atttctggtggaaagccagcctattcctttcatgtgagcgctgatggacaaatgcagcct
gtgccttttcctccagacgctctgattggccccggcatcccacgccatgcacgacagatc
aatactcttagccacggagaggtggtgtgtgctgtcaccatcagtaacccgactcgtcat
gtctataccgggggcaaaggctgtgtgaaggtgtgggacatcagtcatcctggtaacaag
acccctgtttcccagctagactgccttaacagggataactacattcgctcatgtaggctg
cttcctgatggacggacgctaattgttgggggcgaggcaagcactttgtctatttgggat
ttggctacaccaactcctcgcatcaaagcagagctgacctcatctgcaccagcgtgctac
gctttggccattagccctgactccaaagtttgcttttcttgctgctctgatggaaacata
gctgtctgggatcttcacaaccagactttggttaggcagtttcaaggccacacagacggg
gcaagttgtatagatatctctaacgatggaaccaagctgtggactggtggtctggataac
accgttcgttcttgggatctgagagagggccggcagctgcagcaacacgactttacttct
cagatcttttctctgggttactgtccgacaggcgactggttagctgtcgggatggagaac
agtaatgtggaggtcctgcatgtcactaaacctgacaaataccaactccacctacatgaa
agctgtgtgctctcactaagatttgctcactgtggaaagtggtttgtgagcacaggaaaa
gacaatctactcaatgcatggagaaccccatatggagccagtatttttcagtcaaaggag
tcatcatcagtgctgagctgcgacatctccatagatgataagtatatcgtgacgggctca
ggagacaaaaaggcgacggtctacgaggtcatctattaa

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