Cyprinodon variegatus (sheepshead minnow): 107085341
Help
Entry
107085341 CDS
T06110
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107085341 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107085341 (dmxl2)
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107085341 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107085341 (dmxl2)
RAVE complex
107085341 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
107085341
NCBI-ProteinID:
XP_015231094
Ensembl:
ENSCVAG00000011203
LinkDB
All DBs
Position
Unknown
AA seq
3113 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSINPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLTDALIEEEDGQMIEDKPHPALSDWNCVWQCKTAASIHIAKW
SPDGEYFATVGKDDCLLKVWYPTTAWRSAVVVQDPSDKKAPPVHFSFVYLAHPRSVTGMS
WRKTSKYMPKGTVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQITENTHSFSSSLPGLAG
NKDKIQHALESIHHLKQLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPSALADSSVFNPEDGTGGGGFVVHWLNNKDLSFTSSMDLFMTQLRKFS
EQHLDQTTEEPLDPEGSPMKFDFDLDEMSDKASSEQGEEGDSGEQGSTKASSPGSSSSMP
LPSMLLERKMETLTIEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTEGESAGTGEQGRMVQRMSRSASICTGLGSTAVSPS
PKLRPGISPAVMMVSKHVDGSLNQWAVTFADRSGFSNVLTVSHKIRYCGHRFHLNDQACH
TVLPLLLTSSHHNALLTPPSAPSSLEGEQPLSFPPPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLIPSTVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GSNTQLLHVFQEDFILGYKPPKESEAYTPAFSTGEDYQHAPFSEKFFLVVIEKDLNGNSV
LQMWHLHLQSVQACVDEPSQQFSFQSQLMVPNQVMNADSSPETSPIRPLPRSASSANLQS
ASKLILNSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSHVRF
WRCAVEGDEGHGMDNRVYCWEPWVLMNEEEDNNSAVSVSGRPVAVSCSYIGRLAVAFKQP
RQGLLHSSVEDFSMHVSIYECESTGGSEWVLEQTVHLDDYVRPSTTLDPRVSVDSNLFVY
SRTDLYMSRDHSSPNIKHFIHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQTSSKE
GVAVITLPLGGSIKQGIRSRWILLRSIDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMH
VYAQWHQDKKPGEGEEGNLSSADIAGGQTAVTSSVFEGRARSKSVFEGSTGVDEALRAPA
GLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVRDVE
AGEGGSRRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALMLADLDTSFKG
AEESVKTTKVVDGDAAQKSTEDQYADLFQVPTVTTDDFVNFAADKPERKSRVINLSQYGP
SYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTIATTSAEVTGSNDQQYTGGEALD
ECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQRG
DPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRNNDPLDAALFYLAMKKKAVLWGLF
RSQHEEKMTQFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVLME
KMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIAYW
IMKDYTRALDTLLERNPKEDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFASPEATAT
TVGLTAEKSTADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVKKSGSSSLSKAS
SKANINASQPLENGTQGAVDWGSSAAPAPAWGVNDSVGSLDWSQPLVKVEEDDLKLDWGD
DKDDEEDEDEDGLTMKKPETEDKGSKSDDHKQQKGDSQGDSEVDVIAEQLKFRACLKILM
TELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVERKEEGPEVERDRTASVDIS
DEALENMEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKGGGV
TSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIANPVLHLSNHIHD
ILYTITMLEAPPHPDIIDDRVNALHTLAASLSACVYQALCDSHSYSSQTEANQFTGMVYQ
GLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEDQPKLSVLLCEAVVAV
YLSLLIHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGARVIIKPKRPELPPVPAEFEAAN
PEENQETGRPEQSHLSPNPTPFPSETQHPKRHPPPVSRGERLGTVAPATKASSAPPQPPA
EDVDRYRRRFNMRMLVPGRPVKETPATPPPVPAERPAYREKFIPPELSMWDYFVAKPFLP
LSESNALCDSDESGAEDEDDDDDAFLSDTQMTEHSDFNSYSWVLIRLVMVKLAHHNVKNF
IPLTGLDFTDLPVTSPLCNAVLKTLENWEQLLLEQMNKFDGPPPNYINTYPSDLSAGAGP
AILRHKAMLEADNTPFKTKNHQSFPVRRLWHFLVKQEVLQETLIRYIFTKKRKQSESLEN
HVDRINPNCIAGASSPYKVEADLGYPGGKAKIIHKESDIIMAFAINWANPNEIVLASTHD
VQEVDVSSLVAVQPYTWIGEDFDKESRSSDDIDHRSSHTNIAQASSMSFAPPPMSVSASM
PWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQ
AGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKTCGDFAFITS
SSLIATAGQSNDNRNVCLWDTLISPGNTIVHAFPCHENGATVLEYAQKQQLLITGGRKGF
VCVFDIRQRQLLHTFQAHDSAIKALALDPFEDFFVTGSAEGNIKVWKLAGHGLMHSFSNE
HAKQSIFRNIGAGVMKVETRPGNRIFTCGADGTLKMRVLPDRYNIASSIVDVL
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtactgacgggagcggtgaacccgggagattgttgctactccgtc
ggcagtgttaatgacattcccttcacggcctacggatcaggatgcgatgtggttatcttg
gctagtgactttgactgtgttcagatcatcccaggagctcagaatggaaacatacaggtg
ggctgtgtggagtgctcccaccagcttggcaggattgctgcttcttatggaaacacagtc
tgcatcttcgaacctctttccatcaatccaaataaacgccacaagcaacttaattaccag
tggcaaaagacaggacagttctttcttgatgccatcacctacaacctcgcctgggaccca
caagggaaccgtatcctggcagcaactgagcgtctccagctgtgggctcctccattgaca
gatgccctaatagaagaggaggatggacagatgatcgaggacaaaccccaccctgccctc
agtgactggaactgtgtctggcagtgcaagactgcggcttctattcacattgcaaagtgg
tctcctgatggggagtactttgcaacagtaggaaaggatgactgtttacttaaggtgtgg
tatcccaccaccgcctggcgctctgcagtggtcgtccaggatccatccgataaaaaagct
ccacctgttcacttctcctttgtttacttggcccatcctcgctcagtcactggaatgtct
tggaggaagaccagcaaatacatgcccaagggaacagtgtgcaatgttttgctcacatcc
tgtgaggacggtgtttgtaggctatggtctgaaacccttttaccagaggatagtctgctt
ggtgggcagatcactgagaacacacactctttcagctccagcctcccaggcctggctggg
aataaggacaaaatccagcatgctttagagtcaatccatcacctaaaacagttgcggcgt
ggccggcggcggtcctctgctctggtggcacacagcgagctgcttccctctcagctgggc
acacaagacgctcacactcaccgccacattgctcatcatgccaacgccttgtgtcacttt
catatctctgccagtattaacccaaatacagatatcccctcagcacttgctgactcctca
gtattcaaccctgaagacggcactggtggtggaggctttgtggttcactggcttaacaac
aaggacctcagtttcacttcctcaatggacctttttatgacacagctccgaaagttctcc
gagcagcaccttgaccagacgactgaggaacctcttgatccagagggatcccctatgaag
tttgattttgacctggatgagatgtccgacaaagcctcctcagagcagggagaagagggt
gattcaggggaacaaggaagcactaaggcttcctcacctggatccagctccagcatgcct
ttaccatccatgctgctagagaggaaaatggagactctgaccatagagtggaacaagagt
ccagacatgttgttcacaatacatcccacagatggttccttcttggtttggcatgtaaag
tacctggatgaattcaaccaggggattttcagacaagttcaggtctccttctcctcacgc
atcccagtagcatttcccacaggtgacgctaactcccttagtaaaaacatcttgatgtat
gcctgcactctgactgagggtgagagtgctgggacaggtgagcagggaagaatggttcag
cggatgtcccgctcagcttcaatatgcaccggtctgggctccaccgccgtctccccctca
ccaaaacttcgtcctggcattagccctgcagtcatgatggtctccaagcatgtcgatgga
tctctcaaccagtgggcagtgacatttgccgaccgttctggcttctccaacgtcctgact
gtatctcacaagattcggtactgcggtcaccgtttccacttgaatgaccaggcgtgccac
acagtgctgccactcctgctcacctcctcccaccacaacgccttgctcacccctccctca
gcccccagcagtttggaaggggaacagcccctgtcctttcctccaccaaaaggacttccc
aggaagcagcttcgtaatgcagctacaaggacattccacgacccaaacgccatttatagt
gagctgattttgtggagagtggatcatatcggacccctgtcctgcactggaggggtgtct
gaactggcccgaatcaactctctacacacgtctgcctttagcaatgtagcatggctgcct
acgctgatacccagcactgtgcttggaacctactgtaacagtgccagtgcctgctttgtg
gcatcagatgggaaaaacctgcgtctctatcaagctgttgtggatgccaggaaactactt
gatgagctgtcagaccctgaaacatctaaactggtgggtgaggtgttcaacatcgtcagt
cagcagtccactgccagacctggatgcatcattgagctggatgtcattacaaaccagtgt
ggctccaatactcagctgctgcatgtcttccaagaggatttcattcttggttacaaacct
ccgaaggaatcagaggcgtacacaccggctttttccactggagaagattaccaacatgct
ccattttctgagaagttcttcttggtcgtaatagagaaggatctaaatgggaactcagtc
ctgcagatgtggcacctgcatctccagtctgtgcaggcctgtgtcgacgagcccagccag
cagtttagtttccagagccagctcatggttcccaatcaagtcatgaatgctgactcgtcc
cctgagacctctccaatcagacccctgccacgatcagcttcttcagccaacttgcaatca
gccagcaaacttatactcaattccaagctagtgtacagcaagcgcttagatttaccccat
ggggtggaagttaccagggcaacaccgtctgcaggtcatctgagctcctcctccatctac
cctgtgtgtctggctccgtacctgattgttacaacctgctcagattctcatgtgcgcttc
tggcgctgcgctgtggagggcgacgaaggccatggcatggacaaccgggtgtattgctgg
gaaccctgggtactcatgaacgaggaggaggacaacaacagtgcagtgtctgtgtcagga
cggccggtggctgtttcctgctcctacatcggcaggctagctgtggctttcaaacaacca
cgacaaggactgcttcatagctctgtggaagacttctctatgcacgtttccatttatgag
tgtgagtctactggcggctctgagtgggttttagagcaaactgtccatcttgacgactat
gtcagaccctcaacaacgctggatcctagagtcagtgtggactccaacctttttgtctac
agcaggactgatttgtacatgagcagagaccatagctcgcccaatattaagcacttcatc
cacctggactggctatctaaggaggatgggtcccacattctcacagtaggggtcggctct
aacatcctaatgtacggccgcatttccggcatggtgaatgagcagactagcagcaaagag
ggggtggctgtgattaccctcccactaggtggcagtatcaaacaagggatccgttcacgc
tggattctgcttcgatccattgacctcctttcctccgtagacggtacaccttcgctgcca
gtgtccttatcctgggtgagggatggcatcctggtggtgggtatggactgtgaaatgcat
gtgtacgcacagtggcaccaggacaagaagcctggtgaaggagaagagggcaatctgtca
tctgcagacattgctggaggtcagacagcagttacctcctctgtctttgaagggagagcc
aggtccaagagtgtttttgaagggagcactggagtggatgaagctctgcgtgcccctgca
ggtctgcaggagggaggactgtttgaggcagctcactctctctctcccactctgccacaa
taccacccgacccagctgctggagctcatggacctgggcaaagtacggcgggcaaaggcc
atacttgcacatctcgtaaagtgtatagctggagaagttgctgtggtcagggatgtggag
gcaggtgaaggcggatccaggaggcacctctctcgaacaatcagcgtgaccggaagcaca
gcaaaggacaccatagtggcaggccgagatggaggaagggattacacagagatcaactcc
attcctcctttgcccctctacgccttgatgttggctgacctggacacctcatttaaggga
gccgaggaaagcgtcaaaacaacaaaggttgttgatggtgatgcagctcagaaatccaca
gaagaccagtatgctgatctcttccaggtgccaacagttactacagacgactttgtgaac
tttgctgctgataagccagagaggaaatctcgggttatcaacctttctcagtacggaccc
tcatatttcggaccagagcacgctcaggtattgtccagtcacctcatgcattccagcctc
ccaggactgacccggctggagcagatgttcttggtggccttggcagataccattgcaaca
acaagtgcagaagttacaggctccaatgatcaacagtacacagggggagaggctcttgat
gagtgtggactgaggtacctgctcgccatgcgtctccatacctgcctgctcacttctttg
cctccactgtatcgtatgcagctgcttcaccaaggcctttccacttgccactttgcatgg
gccttccactcagaggctgaggaggagctgctgaacatgattcctgccatgcagagaggc
gaccctcagtggtctgagctgagagccgtcggcgtgggatggtggatacgcaacatcaac
actctgaggaagatggtggagaagctgggtaaagcagcattccagaggaacaacgacccg
ctagatgctgccctgttctacttggccatgaagaaaaaagctgttctctggggtctcttc
aggtctcagcatgaggagaagatgactcagttcttcaaaaacaacttcacagaggaccgc
tggcgaaaggcagctctcaaaaacgctttctccctgctgggaaagcagcgctttgaacag
tctgctgcctttttcctattagctggctcccttaaagatgcaatagaggtgttgatggaa
aagatggaagacctccagttagccatgatagtagccaggctgtatgaggctgactttgaa
aattcgtccacctgccaaggcctcctttacgagaaggttctgggctgtaacagagacggg
agcggttatcactgctccagactgcatccagaccccttccttcgtagcatagcctactgg
attatgaaagattacacccgagcccttgatactctcttagagagaaaccccaaagaagat
gagaatccggatgtgatggtgaaatcttgcaaccctgtggtgtttagtttctataactac
ttaaggacgcatcctttgatcatccgtcggcactttgcaagtccagaggccacagccact
accgtgggtctaactgctgagaaaagcactgcagatgagatcaaccttattgagcgcaaa
ttgttcttcactactgccaatgcccactttaaggtgggttgtccagttttggctctagag
gtgctgtctaagattcccaaggtaaagaaatctggctcctcatctctcagcaaagcttct
tccaaagcaaacattaacgccagccagcctttggaaaatggcacccaaggagctgtggac
tggggctcctctgcagcgccggctccggcctggggagtaaacgatagcgttggtagtctg
gactggagccagccccttgtcaaggtagaagaagatgacctgaagctcgactggggggat
gacaaggacgatgaagaagatgaagatgaagacggtttaaccatgaagaaaccagagact
gaggacaaaggctcaaagagtgatgaccacaaacaacaaaaaggagactcacagggcgat
tccgaggtggatgtgattgcagagcagctgaagtttcgtgcctgtctgaagatattgatg
actgagctgcgaacgctagctacaggcttcgaggtagatggagggaagctacgttttcag
ctctacagttggttggagaaggagatcgcagcaatgcatacaatctgtaactacaaggtt
gagaggaaagaagaaggaccagaggttgagagagatcgtacagcatctgtggacatttcg
gacgaggcgctggagaatatggaggctggggcttatgagcgtcaccagatggagcgacgc
cgcctccaagccaagcagcaacattctgagaggcgcaaggcatggctaaggaagaaccag
gcactgcttagggtcttcctgtcctactgcagccttcatggagccaagggaggcggggtc
acctctgttcgcatggagctcctcttccttctccaagagagtcagcaggagaccacggtg
aagcaactgcagtctcctctgcctctgcctacaactcttcctctgctgtctgcatgtatc
gccaccaccaagacggtcatagccaatcctgtcctccacctcagcaaccacatccacgac
atcctctacaccatcaccatgttggaggccccgccacatccggacatcattgatgatcgg
gttaatgcgcttcacacgctggcggcgtctttgtctgcttgtgtctaccaagccctgtgt
gacagtcacagttacagcagtcagacagaagccaaccagtttacaggaatggtgtaccag
gggctgttgctgagtgaaagaaagagacttcgcacagaaagcattgaggaacacgttact
ccaaattctgcgcctgcacagtggccaggtgtgtcgtccctgatctctctattgacgtct
gcaagggaggaggaccaacccaagctcagcgttctgctgtgcgaggcagtggtggcggtt
tacctttcgctgctcatccacggcttgggcactcacaacagcaatgaactcttccgcctc
gctgcacatcctctcaacaaccgcatgtgggctgctgtctttggaggaggagcaagagtt
ataattaagccaaagcggcccgagcttccaccagtgccagctgagtttgaggcagccaat
ccagaggagaatcaagagacaggaagacctgagcagagccacctctccccaaaccctact
cccttcccctctgaaacccagcaccccaaacgacaccctcctcctgtttcaaggggagag
aggctgggcactgtggcaccagcaactaaggccagctcggccccccctcagccccctgca
gaggacgtggaccgctacaggcgcagattcaacatgaggatgctggttcctggacgccct
gtgaaagagacccccgccactccacctcctgtgcctgcagagagacccgcctacagagag
aagttcattccccccgagctgagcatgtgggactattttgtagctaaacctttccttcca
ctctcggagagcaacgctttgtgtgattcagacgaaagtggcgctgaggacgaagatgat
gatgatgatgccttcctctctgacacacagatgacagagcattcagatttcaactcctac
agctgggttttgatccgtctggtcatggtgaaactggctcatcacaatgtgaagaacttt
atccccctcactggccttgacttcacagatctcccagtcacttcccccctttgcaacgct
gtactgaagactttagagaactgggagcaacttttactggagcagatgaacaagtttgat
ggtccgcctcccaattacatcaacacatacccctccgacctgagcgcaggagctggccct
gccatactgcgacacaaggccatgctagaggctgacaacacaccgttcaagacaaagaac
catcagtccttcccagttcgtcgtctttggcatttcctggtcaaacaggaagttctacag
gagactttgatccgttatatctttaccaagaaaaggaagcagagcgagtctttagagaac
catgtggaccgtataaacccaaactgcatagctggagctagcagtccctataaggtagag
gcagatctgggctaccctggaggaaaagctaaaatcattcacaaggaatctgacataatt
atggcttttgctatcaactgggctaaccccaatgagatcgtcctggcgtccacccatgac
gtccaggaggtggacgtctctagtctggtggctgtccagccctacacttggatcggagag
gactttgataaggaatctcgaagctctgatgacatagaccatcgttcctctcacacaaac
atcgcccaggcgagctctatgtcctttgcaccaccacccatgtcagtctctgcctccatg
ccgtggctcggtagtggtcagaccagcatgggagcaagcgtgattatgaaaagaaatcta
aacaacgtgaagagaatgacatcacacccaatatatcagtattacatgacgggggctcag
gatggcagtgtgagaatgtttgaatggaacagaccgcagcagctcatttgcttcagacaa
gcaggcaacgctcgtgtcacccggctctacttcaactcccaaggcaataagtgtggagtt
gctgatggcgaaggtttcctcagcctctggcaggtcaatcagacatcgtccaaccccaaa
ccttacctgagttggcagtgccactcaaagacctgtggcgattttgccttcatcacatcc
tccagcctgattgcaacagctgggcagtccaatgataacagaaacgtttgcttgtgggac
accctgatttcacctggcaatactatagtccatgccttcccctgccatgagaatggggcc
actgtgctggagtatgctcagaaacagcagctgcttatcactggaggcaggaaaggcttt
gtgtgtgtgtttgacatccgccagagacagctgctgcacactttccaggcccatgactca
gccatcaaggccctggcccttgatccctttgaggacttcttcgttaccggctctgcagag
ggcaacatcaaggtctggaagttagcaggccacgggctcatgcactcatttagcaatgaa
catgctaagcagtcaatcttccgcaacatcggtgccggtgtcatgaaagtggagacgcga
ccgggaaaccgaatatttacctgtggagcggacggcaccttaaaaatgagggttctccct
gaccgctacaatatcgccagcagcattgttgacgtcctgtga
DBGET
integrated database retrieval system
