Cyprinodon variegatus (sheepshead minnow): 107085346
Help
Entry
107085346 CDS
T06110
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
107085346
NCBI-ProteinID:
XP_015231102
Ensembl:
ENSCVAG00000011031
UniProt:
A0A3Q2E0U6
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MGQGAALLLSELLLLLAASQTLLAVSFPEDIVPLDVVDAHFTRRYPVFRGRPSVNDSQHR
LDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIISYRKLTWRSGQGDRDMCAVKGKHRD
ECHNFIKVLVPRNDDLVFICGTNGFNPVCRYYRLDNLEFDGEEINGLARCPFDSKQTNVA
LFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFF
YREIAVEHSNLGKVVYSRVARICKNDIGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDV
LQSITDIIDINGVPSVVGVFTTQMNSIPGSAVCAFSMTDIEKVFMGRFKEQKTPDSVWTP
FPEEKLPKPRPGSCAGHGPAASFKSSVEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKTR
VRYRLTALAVDSQAGPHKNYTVVFIGAESGIVLKVLAKTSPLSLNDSLLLEEIDVFNKAK
CPSNRADDKRVLSLHVDNNTHSLYVAFSSCVIRIPLSRCERHSSCQKSCIASRDPYCGWK
AHGACERIQPGLLNGYEQDVEYGKTAHLGDCQVFLGTTSAPGVKSFGDPTSDMEFSSASV
TVQPSEPIHPPVLIPSKSPSSGPLPEHYGSGFVLQDDPATSHSLNSLPGGPEGVSDIYTG
ESNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSVLHKPRHAHKDTESAPSCSDSTGS
FVKLNGLFDSPVKEYQTNIDSPKLFTNLLSNGKDINTPNGDTKTMILRDSCQPPELAALP
TPESTPVLQQKGLQPIKNQWEKAHGKVSGSRKEVNPSAKGPQFLSSPAPTNTNPNHPHLA
LGHSNIPSAVVLPNATHDEPNLDNCDETLPHSSEKKLKNPDCRGSRKDQKRSVDARNTLN
DLLKHLNDSVANPKAILQEESGPCPRPHLTLEPMEELTEVPPAVPSREASLYSPSSSLPR
HSPTKRVDVPMPSTPTSPTGSLSMGGTLERQRGSYQLHRSASHRQSLSTPTNGVTMGVSV
SRQHSMNRGGYMPPTPPSRLDSHGAMVAPGMHSPHLPSVSRQSSYSGHGSLPRTGLKRTP
SLKPDVPPKPNGFPPQTPQMKVSNKYSY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggccagggagctgcgcttctgctcagcgagcttctgctgttactggcagcttcacaa
actctccttgcagtcagcttcccggaggacatcgtgcccctcgacgttgttgatgctcac
ttcacacggaggtaccctgtgttcagaggcaggccctctgtcaacgactcacagcatcgc
ctcgactttcagctgatgaccaagatacaggacacgctatttatcgctggcagagatcag
gtgtacctcgtcagcttgagagaatcgtacaggaatgagatcatttcttaccggaagtta
acgtggcgatcaggccaaggtgacagagacatgtgtgctgtgaagggaaaacatagagat
gagtgccacaattttattaaagttctggttcccagaaatgacgacctggtgtttatctgc
ggcaccaatggcttcaaccccgtgtgcagatactacaggctggataacctcgagttcgat
ggggaagagataaatggtttggcgcggtgcccgttcgactccaagcaaaccaacgtggcc
cttttcgctgaaggaaagctgtattctgcaacggttgccgacttccaggccagtgattct
gtcatctatcgaagtatgggtgatggatcagccctgagaaccatcaaatatgactcaaaa
tggctcaaagaaccacatttcctgcatgcagcagagtatgggaattatgtgtactttttc
taccgggagattgccgtggaacacagcaatttgggaaaggttgtttattcccgagtggct
cgaatctgcaaaaacgacattggagggtcacagcgggtgctggagaagcactggacctct
tttgtgaaggccagactgaactgttctgtgccgggggagtccttcttttactttgatgtc
cttcaatctatcactgacatcatcgacatcaatggcgttccctctgtggtgggcgttttc
acaacacagatgaacagtattccaggatcagcagtgtgtgccttctccatgactgacata
gagaaagtattcatgggccgcttcaaggagcagaagacccctgactctgtgtggacgccg
tttccggaggagaagctcccgaaaccccgacctgggagctgtgcgggtcatggtccagct
gcatcctttaagagctctgtggagttcccagatgacaccctgcagttcatcaagtcccac
ccccttatggacacagctgtgccttcgattggggacgagccttggttcaccaagacacgt
gttcggtacagactaacagcgctggctgtagacagtcaagcaggacctcacaagaactac
actgtggtcttcattggagcagagtctgggattgtcctcaaagttttagcgaagacttcc
cctttatccctaaatgacagcctgttgctggaggagattgacgtcttcaataaggccaag
tgcccatctaaccgtgcggatgacaagcgtgtcctctcgctgcatgtggacaacaacaca
cacagcctttatgtcgccttctcaagctgtgtcatccgtattcctctgagccgctgtgaa
aggcactcgtcctgccaaaagtcatgcatcgcatcaagggatccttactgtggttggaag
gcccatggtgcctgtgagagaatacaacctggtttattgaatggatacgagcaagatgta
gaatatgggaagactgcccacctgggagactgtcaagtgtttttgggcactacctcagcg
ccaggtgtcaaatcatttggcgaccctacctctgacatggagttttcatctgcatcagtc
actgtccagcccagtgagcccatacatcccccagtactcatacccagtaagagccccagc
tcagggcctctaccagagcactacggctcaggctttgtgctacaagatgacccagccaca
tctcattctttaaactctctcccaggggggccagagggtgtatcggatatctatacaggt
gaaagcaaccaaatggtccacatgaacatcctcatcacctgcgtcttcgctgcttttcta
atgggggctctcctggccgggctcatcgttttctgctatcgggactctgtcctccataaa
ccaagacatgcccacaaggacacggagtctgcaccctcctgttctgactccactggaagt
tttgttaaacttaatggcctatttgatagccctgtaaaggagtaccaaaccaacattgat
tctccaaagctcttcaccaatctgctgagcaatggtaaagacatcaatacgcccaatggt
gacaccaagaccatgatcttgagggacagctgtcagccccctgagctggccgctctgccc
acaccagaatccacccctgttctccagcaaaaaggcttacagcccataaaaaaccagtgg
gaaaaggctcatggaaaagtcagcggatcccgtaaagaggtcaacccatcagccaagggt
ccacagttcctttcttcacctgcacctactaatacaaatcccaaccaccctcaccttgct
ctgggacactccaatatccccagtgcagtggtgttaccaaatgccacacatgacgagcct
aatctggacaattgtgatgaaactttaccacattcatctgaaaagaaactgaagaatcca
gattgtaggggtagcagaaaagatcagaagaggtctgtagatgcaaggaatacactaaat
gatcttctaaagcatctcaatgactctgtggccaatcccaaagccatactacaagaagaa
tcggggccttgtccaaggcctcacctcacactggagcccatggaggaactaactgaagta
cccccagccgtgcccagtcgtgaggcttcattgtactctccctcgtcctctttaccaaga
cacagccccaccaaaagggttgatgtgcccatgccctctacacccacttcacccacagga
agcttgagcatggggggcaccttggaaaggcaaagagggagttaccaactccaccggagt
gcctctcacaggcagtccttatcaaccccaacaaacggagtaaccatgggggtatctgtg
tctcgtcagcacagtatgaataggggaggatatatgcccccaacgcccccctcaagactt
gactctcatggtgcaatggtggcacccgggatgcactcacctcacctaccttctgtttcc
agacagagcagctacagtgggcatggctcgcttccccgaacagggcttaaaaggacccca
tcattaaagccagatgtgccaccaaaacccaatgggtttcctccacagactccacaaatg
aaagtgtctaataaatacagttattaa
DBGET
integrated database retrieval system
