Cyprinodon variegatus (sheepshead minnow): 107085457
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Entry
107085457 CDS
T06110
Name
(RefSeq) transcriptional activator GLI3-like
KO
K06230
zinc finger protein GLI3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107085457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107085457
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
107085457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
107085457
NCBI-ProteinID:
XP_015231257
Ensembl:
ENSCVAG00000008472
UniProt:
A0A3Q2CN19
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
METQSQASSAAEKKKRVETIVATKGSSARTDISEKAVASSTTSNEEESSSTPYNRERRNA
ISSQAQTPGALDRTVNEEPSTSTEERPSLLKKELHGSLPHLSDHALPYRGTLFAMDPRNG
YLDSHYPAPPFFPTFHPPVPIDERHTQGRYFYEPSPVPPLHVPPTLGSPAFSDISLIRIS
PQRNPSVGAESPFHPPHPYISPYMDYIRSLHSSPSISVVPASRGLSPADAAHTSLTTAEY
YHQMALLAGHRSPYTTDLLPTVASPAGASSASALHMEYLQAMENSRFPSPRLPARPNRKR
PLTISPLSEHSLDLQTMIRNSPNAIVTTLMNSSRSSSSTSGSYGHLSARAISPALSFAYP
PTPVALHVHHQLMGRQPGIVGSAFGHSPPLVHPTPPFATQRPVPVIPPPGLGSNERSAVS
NDSSQAKPTSESAVSSTGDPMHHKRSKMKPEDELPSPGAVSVQDHPDGMTLVKEEGDKDE
SKQEPEVVYETNCHWENCCREFDTQEQLVQHINNDHIHGEKKEFVCRWEECSREQKPFKA
QYMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSN
ASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRP
PPQLRESGGNSQGRSPGQLPLGGYTDQREYNHTTSKQDECLQVKSIKTEKPMTSQPSPGG
QSTCSSDQSPVSTYPSSGVQLAVSARRSPGEGLEEDDEEEENEEEVEEECEGESVPIMDS
TVSTATAAMLTLQARRSIGRPMRWMEHMKMERLKQVNGALPRLGSLSPTPPPKSSGMPNI
LGKGSCLGRQWGVPAPQPPAHPELASTELNVLNLLRDRRDSSGSAASSAYLSSSRRSSGI
SPCFSSRRSSQASQGDGAVPGHHHRRLHNLSSTDSYDPISTDASRRSSEASQYGGGVAGG
GVGALSGGSCGVGVSYGGGGGSRGMLNLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSL
KTRMAMMEEGGSNHSLPPLVRPPRCGEANGELNNGLMGHAGYRRRVLYPGEGNLNGNRRA
SDPVRSQAPESYSLPPVQRFNSLNNLHPLPPLAHNPSAEYRSFSLQNYTRSEGNLQRGLQ
HSTNTVSIAENAALEALAMEDEGEVGLFLGDEDILPDDLVQYLHSQDQMNGGSNIQNEGQ
INSSQRDSSYPVVEAGENGNFPGSHHLQPQQILDRKSPSKLPIQWNEVSSGSADRSPQRL
QSHNLQCERWPEPPIASTGRLRNMSVPQQVSVDFHSSCPVANQSQSSSYINSGVKLEALP
NSCMEMRGTRMSNMSHGINGGLPQGLKQQMTNGPLKPFSHLEQNNSRTMWQVGNNLMLTR
ASMDSLSNLSHGTASDHNPLVHASYPQINNYKNLAKTQQFFNLQSSTEILPNPHQPQQVQ
KNGDQFSLMCEVSGLKLENHENMGQTLSDCLSYGTADCKSSSFPILEEQRLLESMVLSEG
SGNRNTNTLPSPGTDLVTSTVDGQVPGILDDGVNLDFGTMLEDGYDQGSLVSDVLSPSMF
QGLSRTSSRLTTPQGSTTFNSVAPGLSNMAIGEMSSLLTTLAEESKFLAIMQ
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcccaggccagttcagcagctgagaagaaaaagagggtggagaccatc
gtggctacgaagggctcgtcggcacgcactgacatcagtgagaaagctgtggcttcaagc
accacctcaaacgaagaagagagctcaagcactccatacaaccgtgagaggcgcaatgcc
attagctcccaggcccagacgcccggcgcccttgacagaaccgtgaacgaggaaccctcc
acctcgacggaagaacgcccgtccctgctcaaaaaggagctgcacgggtccctgccccat
ctctctgaccatgccctgccctacagaggcacgctgtttgccatggacccccgtaatggc
tacctagactcgcactaccccgctcccccgttctttcccaccttccatcctccggtgcca
attgacgagagacacacccagggaaggtacttctacgagccatcgcctgtgccccctctt
catgtgcctccaacgctcggcagtccagctttctccgacatctccctcattcggatctcc
ccccagcggaacccatcagtgggggcggagtcgcccttccaccctccacacccctacatc
agcccatacatggactacatccgctccctccacagcagcccctctatctccgtggtacca
gccagccggggcctcagcccggcagatgcagctcacaccagtctgaccacagccgagtac
taccaccagatggctctgctggcgggccaccgcagcccgtataccacagaccttctcccg
actgtggcgtctccagccggggcgagcagcgccagtgccctgcacatggagtacctgcag
gctatggagaattcccgtttcccaagccctagacttccagcacgacccaacaggaagcga
cccctgaccatctcaccactctccgagcacagcctcgacctacagaccatgatccgcaac
tctccaaacgccatagtaaccacactgatgaacagctcccgctccagctcctccaccagc
ggctcctacggtcatctctccgccagagcaatcagtccggcattgagctttgcctaccct
ccaactcctgtggcattacatgtccaccatcagctgatgggccgccagccagggatcgtg
ggctccgccttcggccacagcccgccgttagtccacccgacgccgccctttgccacacag
cggcccgtacctgttatccctcctcctgggctgggctccaatgaacgctcggccgtctcc
aacgactcgtcacaggccaaaccgacaagcgaatccgctgtgagcagcacaggcgaccca
atgcatcacaaacggtccaaaatgaagccggaggatgagctgccgagtccaggagcggtg
agcgtgcaggaccatcctgatgggatgactctggtgaaggaggaaggggacaaagacgag
agcaaacaggagccggaggtggtttatgagacaaactgccactgggagaattgttgccgg
gagtttgacacccaggagcagctggtgcagcacatcaacaatgaccatatccatggtgaa
aagaaggagtttgtgtgtcggtgggaggaatgctctagagagcagaagcccttcaaggca
cagtacatgctggtggtccacatgcgcagacataccggagaaaaacctcacaagtgcaca
tttgaaggctgcacaaaggcctactcacggctggagaacctgaaaacacacttacgttcc
catactggtgaaaaaccgtatgtgtgtgaacatgaaggctgtaacaaggctttttccaat
gcatccgatcgggccaagcatcagaaccgcacgcactccaatgagaaaccttacgtctgc
aaaatcccaggctgcaccaaacgctacacagatcccagctccctacgaaagcatgtaaag
acggtacacgggccagaggcccacgtcaccaagaaacagcggggcgattacccacggcca
ccacctcagctgcgggaatcagggggtaacagccagggtcgctcacccgggcagctgccc
ctgggtggatacacggaccaaagggagtacaaccacactacctcaaaacaagatgaatgt
ctgcaggtgaaatcaatcaagacagaaaagccaatgacgtctcagccaagccctggcggt
cagtctacatgcagcagtgaccagtccccagtcagcacctatcccagcagtggagtccag
cttgctgtgagcgctagacgctcgccaggggaggggctggaggaggacgacgaggaagag
gaaaacgaagaggaggtggaggaggagtgcgagggggagtcagtccccattatggattcc
acggtgtccactgccaccgcagccatgctgaccctgcaggcaaggcgaagcattggccgg
cccatgcgctggatggagcacatgaagatggagaggctgaagcaggtgaatggagcgctg
cccaggcttgggtccctgtctcccacaccgccccctaaaagttcaggaatgccaaacatc
ctggggaagggatcgtgtttgggcaggcagtggggggtgcctgctcctcagccacctgct
cacccagagttagccagcacagagctgaacgtgctcaacttgctcagagatcgacgtgac
agcagtgggagtgccgccagttcagcctatctgagtagcagtcggcgctcctcaggcatc
tctccctgcttctccagccggcgctctagccaggcttcacagggtgatggcgcagtgccg
ggccaccatcaccgccgccttcacaacctcagctccaccgactcctacgaccccatttcc
acagacgcctcccgccgatccagtgaagctagccagtatggaggtggagtggcaggagga
ggagttggggctctctcaggtggaagttgtggagtgggagttagctacggaggaggaggt
gggtcgagagggatgctcaatttaactcctgcacagcattaccaccttaaggccaagtat
gcagcagctactggtggcccaccccccacgcctttacccaacatggaacgtatgagtctg
aagactcgcatggccatgatggaggagggtggcagcaatcacagccttccacctttagtc
aggccacctcgctgtggtgaagccaatggtgagctcaacaatgggcttatgggacatgca
ggttacaggaggagggtcctctatcctggtgagggaaatctgaatggtaaccgaagggcc
agtgacccagtgcggtcacaggctcctgaaagttatagtctgcctccagtgcaacgtttc
aacagccttaataatctccatcctcttccccctctggctcataatccctcagctgaatat
cgcagttttagccttcagaattacacacgctcagagggaaacttgcagagaggcctgcag
cattccacaaacaccgttagtattgcagaaaatgcagcattggaagcattggcaatggag
gatgaaggagaagttggcttatttcttggggatgaagatattttacctgatgacttggtg
cagtatctgcattcccaggatcagatgaatggtggctctaacattcagaatgagggacaa
ataaattctagccaaagggacagctcctatccagttgtggaagcaggggaaaacggtaac
ttccctggctctcaccatctccagccgcagcagatacttgataggaagagtcctagtaag
cttccaatccagtggaatgaagtaagctcagggagtgctgacaggtctcctcaaaggctt
caaagccataatttgcagtgcgagagatggcctgaacctccaattgcatcaactggcagg
ttgcgaaacatgtcggtgccccagcaggtgtctgtggatttccacagcagttgcccagta
gctaaccagtcacaaagttctagctacattaacagcggagtgaagctggaggcattgcct
aactcttgcatggaaatgagaggtactaggatgtcaaacatgtcacatggcatcaatggg
ggtcttcctcaaggtcttaaacaacagatgaccaatggacctttgaaacctttcagccat
ttggaacagaacaatagcagaaccatgtggcaggttggaaacaacctcatgcttacccgc
gcgtccatggacagtctatccaacctgtcccatggaactgcttctgatcacaacccccta
gtacatgcttcatacccacaaatcaacaattacaaaaacttggcaaaaacccagcagttc
ttcaatctgcaaagctcaactgaaattctcccaaacccccatcaaccgcaacaggtacag
aaaaatggagaccagttttctcttatgtgtgaggtatcagggctgaaactggagaaccat
gaaaacatggggcagactctgtcagattgtctttcctatggcacagcagactgcaagtct
tcctccttccctatactggaagagcagcgtttgctagagtcgatggttttatctgaggga
tcaggtaacagaaacaccaacacccttccctcccctggaactgacttagtaacaagcact
gttgatggccaagtccctggcatattagatgatggggtaaatctagattttggtaccatg
ctggaggacggttatgatcagggtagccttgtctcggatgtattgagcccctctatgttc
cagggattgtcaagaacctcgtcacgcctcacaactccccaaggatctaccaccttcaac
agtgttgctcctggcctgagcaacatggccattggagaaatgagttcactcctcaccacc
ctcgcagaggaaagcaagttcctagctataatgcaatag
DBGET
integrated database retrieval system
