Cyprinodon variegatus (sheepshead minnow): 107085525
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Entry
107085525 CDS
T06110
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107085525
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107085525
09144 Cellular community - eukaryotes
04510 Focal adhesion
107085525
09142 Cell motility
04820 Cytoskeleton in muscle cells
107085525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107085525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107085525
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107085525
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Opsonins
107085525
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107085525
Exosomal proteins of colorectal cancer cells
107085525
Exosomal proteins of bladder cancer cells
107085525
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107085525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
cEGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
107085525
NCBI-ProteinID:
XP_015231371
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MWPLRNLPWLFIPLCAVAVCADGKKMYNRTTEMCHHPCDELLDMITEIHGLRIVTNNLLE
DLERVSKENEEMRISLAELSNDSSRGEADEEDNYLDRDRDGEVWCMQDGRVYEQGDVWEV
DSCTSCSCQDGKVVCQQVLCPPVSCINPSIVDGKCCLACLEKEDGWSPWSEWTHCSVTCG
RGGQQRGRSCNGISGCAGPSLQTRSCSLIKCDRKARADGNWGLWSPWSACTTTCGEGNIT
RIRLCNNPPPSKGGKGCTGNTRETKPCNNTLCPVTGGWTAWNEWSQCSTSCGGGLMSRQR
ECLNPAPQNGGKPCAGEATDYKACNKQPCPVDLCVLSNPCFPGVKCTSKIDGSWECGHCP
VGLKGNGTHCEDENECEVDGLCFIKCVNTDPGFYCLPCPPRYKGNQLYGIGLQEAMKTKQ
VCEPYNPCKDNTHTCHPFADCIYLGLASEDLFKCSCAVGFAGDGSVCGEDSDLDGWPNER
LPCKHNATYHCEPDNCPMLPNSGQEDFDKDGQGDACDPDDDNDNIMDDRDNCPVMFNPRQ
FDSDVDGVGDSCDNCPFDSNPKQTDTDGNGEGDACSIDIDGDEKLNEHDNCPYVYNSDQR
DTDLDGVGDQCDNCPLLHNPLQLDSDSDLVGDMCDNNNDIDEDGHQNSLDNCPYIANSNQ
ADHDKDGKGDVCDPDDDNDGIPDDRDNCRLVPNRDQLDSDGDGSGDACFDDFDNDSIPDA
LDACPLNHDIGVTDFRKFQVVLLDPKGTTQSDPLWIIRSQGTELLQKANSDPGIALGYDK
FSAVDFSVTFYVNTNRDDDYAGIVFAYQSSRRFYVVMWKQVSQGYWEQRPSKAFATAGLS
IKLVHSSTGPGEYLRNALWHTGNTRHQVRTLWHDPNKIGWKDYTAYRMHLTHRPKTGFIR
VVVYEGRGILADSGAVYDHTLAGGRLGLFVFSQEQVIFSDLRYECRDN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctgagaaacttaccctggctctttattcccctgtgtgcagtggctgtgtgt
gcagatggtaaaaagatgtacaaccgaaccacagaaatgtgtcatcatccttgcgatgag
ctgctggatatgatcactgaaattcacggtctacgtatcgtgacaaacaacttgctggaa
gatctggaaagagtatcaaaagaaaatgaagagatgcgtatatccttggctgagttgagt
aatgacagcagcagaggtgaggcggacgaggaagacaactatctggacagggacagggac
ggagaagtgtggtgcatgcaggatggacgggtgtacgagcagggggacgtctgggaggtt
gacagctgcacctcttgctcctgccaggatggaaaggtagtatgtcagcaggtactctgt
cccccagtatcctgcatcaacccgtccattgttgatggaaaatgctgccttgcttgtcta
gaaaaggaagatggttggtcgccatggtctgagtggacccactgctctgtcacttgtgga
cgtgggggacagcaacgtggtcgatcctgtaatggcattagcgggtgcgcggggccctcg
cttcaaacccgcagctgctcactgataaagtgcgaccgcaaggcacgagcagatgggaac
tggggcctttggtctccttggtctgcatgcacaaccacatgcggggaaggtaacatcaca
cggatccgtctgtgcaacaatcctccaccatcgaagggaggcaagggatgcacaggaaac
accagagagacaaaaccatgcaacaacacactctgccctgtcacaggaggctggacagcc
tggaatgagtggtcacaatgctcaacttcctgtggtggaggccttatgagccgccagcgg
gagtgtctgaacccagctcctcagaatggtgggaaaccttgtgctggggaagccacagac
tacaaagcctgtaacaaacagccatgtcctgttgacctgtgtgttctttcaaatccatgt
tttcctggggtaaaatgtacttcaaagatcgatggatcttgggaatgtggacattgtcct
gttggtctgaaggggaatggcacacactgtgaggatgagaatgagtgtgaagtggatggg
ttgtgttttataaagtgtgtgaacacagatcctggtttctactgccttccctgtcctcct
cgatacaaaggaaaccagctgtatggcatagggctgcaggaagccatgaaaaccaaacag
gtgtgtgaaccatataatccctgtaaagacaacacacacacttgccacccgtttgctgac
tgcatttacctgggtttggcatcagaagacttgtttaagtgctcatgtgctgttggcttt
gccggagatggctcagtgtgtggagaggactctgatctggatggttggccaaatgagaga
ctaccctgcaagcacaatgccacctatcactgcgaaccggataactgccccatgctgcca
aactctggacaggaagactttgacaaggatggacagggggacgcttgtgatcctgatgat
gacaatgacaacatcatggacgatagggacaactgcccagtgatgttcaaccctcgacag
tttgactctgatgtggatggggtcggggattcctgtgataactgtccttttgacagcaac
cctaagcagacggacaccgatggcaacggagaaggagatgcctgcagcattgacatagat
ggagatgagaaactgaatgagcatgacaactgcccttatgtgtacaactctgaccagagg
gacacagacctggatggtgtcggagatcagtgcgacaactgtcctcttcttcacaacccc
ctgcagctcgactctgacagtgacctggtgggggacatgtgcgacaacaacaatgacatc
gatgaggatggacatcaaaactctctggacaactgtccctacattgccaatagcaaccag
gcagaccatgataaggacggaaagggagacgtctgtgaccccgatgatgacaacgatgga
atcccagatgaccgggacaattgtagactggttcccaacagggaccagcttgactcagat
ggtgatggcagtggggacgcatgcttcgatgactttgacaatgacagcattccagatgca
ctggatgcttgtcctctgaaccatgatattggggtgacagacttcaggaagtttcaggtt
gttttgttggaccctaaaggaacaacacagtctgaccccttatggataatccgcagtcag
ggaacagagctgctgcagaaagccaactctgaccctgggattgcattaggctatgacaag
tttagtgcagtagacttcagtgtgacattttacgttaacaccaaccgtgatgacgactat
gcagggattgtgtttgcttatcagtccagtcggcggttctacgttgtcatgtggaaacag
gtgtctcaaggttactgggagcagaggccctcaaaagcttttgccacagctggactgtca
ataaaactcgtccattctagcacagggccgggggagtacctacgcaatgctctgtggcac
actggaaacacaagacaccaggtcagaacattgtggcatgaccccaataaaattggctgg
aaggactacacagcataccgcatgcaccttacacatcgacccaagactgggtttatcagg
gtggttgtgtatgagggtagagggattctggctgattcgggagcagtttatgaccacacc
ctggctggaggcagactggggctgtttgtcttctctcaggaacaagttatcttctcagac
ctacgatacgagtgcagagacaactga
DBGET
integrated database retrieval system
