Cyprinodon variegatus (sheepshead minnow): 107085544
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Entry
107085544 CDS
T06110
Symbol
dhx32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107085544 (dhx32)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107085544 (dhx32)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107085544 (dhx32)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
107085544
NCBI-ProteinID:
XP_015231394
Ensembl:
ENSCVAG00000006752
UniProt:
A0A3Q2DWT0
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSIESYSPEAEIFTDSGGEDPASDFGDDLELNHFDGLTFSSRYYKLLEERKSLSVWRIRN
QFEDALQNNQLVIVSGVAQTGRSTEIPQWCAEFCLSAQFQHGMVVCTQTNKQQAVDLVLR
VADEMDVNIGHEVGYTIPLETCCSSDTVLRYCTDDMLLREMMSDPLLEQYGVIIIDQAHE
RTASTDILLGFLKNILLQRPELRVVVLTMSHVVEKLLGHYGSVPLLNLEACGSPEVVYYN
ISSKDYFSSAIALIQEIHRTKESGDVAVFFTSEEEVHHAWSIIQSEGPRSVEELDQIRPV
ILCQSQQGLRPLLTQQVGGMNSRRVFLLTQQQEDLCWTEQSVNFVIDTGVQTKMVYNPRV
RAYSAVHEPISRCQADIRRHLCGPTGKCFRLYPEAGLPQAETYPQILDCNITPLVLFLKR
MEIAGLGPCHFIDRPDPEGLMQAFEELDYLAALDDDGNLSEIGIILSEIPLDPQMAKALL
ASCEFDCVSEMLTIIAMLSAPSCFLQPASQSHRKFQHPEGDHFTLINIYNAFKEKQRNQY
LNVKTWCQDYFLDYSALMIADTIRLELTGTLNRIELPISEPSFGTKTNTDNIKRALLAGF
FMQVARDMDGSGNYLILTHKHVAQLHPFSSYGAQSHKLGVPQWVLFNEYAPSEHNSIKTV
SEISPQKFLEMAPLYFFYNLPPSESKDVLQEMLNAEDSRHCSKKQTTNGSIDADRSCAYE
TQTDKCVIQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaaagttactcgccagaggcagaaatattcactgacagtggaggagaagat
ccagcttctgattttggagatgatttggagttgaatcattttgatgggctaaccttttcc
tctcgttactacaagttactggaagagaggaagagtctttcagtgtggaggatcaggaat
cagtttgaagatgctctgcaaaacaaccagttggtgattgtatctggagttgcacaaact
ggcaggagtacagagattcctcagtggtgtgcagagttctgcttgtctgcccagtttcag
catggcatggttgtgtgcacacagaccaacaaacagcaggctgtggatcttgtcctgcgt
gtggccgatgaaatggacgtgaacatcggccatgaagtgggctacactattcctctagag
acctgctgctcctctgacactgtcttaaggtactgcactgatgacatgttgctgagagag
atgatgtcagaccctcttctggagcaatatggagtcattattatagaccaggcccatgag
aggacagcaagcacagacatcctcctgggtttcctaaagaacatcctgctgcagagacca
gagctcagggttgttgtcctcaccatgtcccatgtggtggagaagctcctgggacactat
ggaagcgtccctcttctcaaccttgaggcgtgtggttctccagaggtggtctactacaac
atcagcagcaaagattacttttcctctgcaatagcattgattcaggagatccaccgtaca
aaggagagcggagatgttgctgtgttttttacatcagaggaggaagtccaccacgcttgg
agcatcatacagagtgagggccccaggtcggtagaggaactggaccaaatcaggccagtc
atcctgtgccaaagccagcaagggctgcgccctttactgacccagcaagtgggcggcatg
aactccaggagggtttttcttttgacccaacaacaggaggatttgtgctggacagagcaa
tcggtcaactttgttatcgacacaggtgttcagacaaaaatggtttacaatccaagagta
cgagcttactctgcggtgcatgagcccatcagtcggtgtcaagcagatatacgcagacac
ctctgtggaccaacaggtaaatgtttccgtctgtatcctgaggcgggcctaccccaggct
gagacctatccgcagattttggactgcaacattacacctctggttctcttcctaaagagg
atggagatagcaggtcttggaccgtgtcacttcatcgatagaccagatccagaaggactc
atgcaggcctttgaggagctggactacctggcagctttagatgatgatgggaacttgtct
gaaattggtattatcctgtctgaaatccccctggatcctcagatggccaaagccctgtta
gcgtcctgcgagtttgactgtgtgagtgagatgctaaccatcatagccatgctgtcagca
ccaagctgcttcctgcagccagccagtcagagtcacagaaagttccaacatcctgagggc
gatcacttcacacttataaatatctataacgcctttaaagaaaaacaaaggaaccagtac
ttaaatgttaaaacctggtgccaggattactttctggattattctgctctgatgatcgct
gacaccattaggttagagctgaccggcaccctgaacagaatcgagcttcccatatctgaa
ccatcctttggaaccaaaacaaacactgacaacataaaaagagctctgctggctggattc
ttcatgcaggttgctcgagacatggacggatcagggaattatctcattctgacacacaag
catgtggcccagctgcacccgttttccagctacggagcccagtcacacaaactgggagtg
cctcagtgggttctctttaatgaatatgccccatctgaacacaacagcatcaaaacagtc
tctgaaatctcccctcaaaagttccttgaaatggcaccactatacttcttctacaatctg
ccccctagtgaaagcaaagacgtactgcaggaaatgctgaacgctgaggattccagacat
tgctcaaagaaacaaaccacgaacggaagcattgatgctgacagaagctgtgcatatgag
acacagactgataaatgtgtgattcagtga
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