Cyprinodon variegatus (sheepshead minnow): 107085676
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Entry
107085676 CDS
T06110
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107085676
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107085676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
DUF16
Motif
Other DBs
NCBI-GeneID:
107085676
NCBI-ProteinID:
XP_015231638
Ensembl:
ENSCVAG00000016230
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MIGHGCLGCGNTACWIERKMMSDASEMLAAALEQMDGIIAGSKAIDYTNGLFDCQSPTSP
LLGGFRVLHLLEDLRAALELMDNEERDNLRCQIPDSTAEGLAGWLHGRMTNVHSSEAVYQ
ERLSRLESDKECLILQVSVLTDQVEVQGEKIRDLDKSLELHREKLNAAEELLQQELLNRT
ALETQKLELMTEVSSLKLKLTALERDHRGNEGLYQEVTDLRFRMTDIENERLQCEKKLKG
AKEELHDLQRHLEEQDEELRRLKGEAHNRITGGERDTEVVKMKRVLELLTSENDEKERRI
KELEESLTKCRRVQELVREKLKEDDYADITDDPSLSVSMEVDQVTLELEGETGRSCDESI
PCIAVLSEMNELDRERQLQAAESSVDDPQSDGSAVTSSTEQVKREAGSSSSSKGKTNDGS
FGSKRVRASFGRGFFKLRGGKQTAGSSDLAEAERKGTEHLDLAGVPPQKSHRAAPLPSSP
EAKKKSSGLRKFFGRLKRSHSTSFNPDDGAETEFRRGGVRATAGPRLGWSRDSKHKAVDT
PFARWSKEDVFAWLQEQGLGLYAAQGQNWVKSGQTLLQASQHDLEKELGMKLPLHRKKLQ
LALQALSSEGDDLQGKLDHNWVTRWLDDIGLPQYKSNFDEARVDGRMLHYMTVEDLLSLK
VGSVLHHLSIKRAIQVLRLNSYDPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLA
EYAPNLRGSGVHGGLMVLEPRFNVEALALLLNIPPSKTLLRRHLATHFHLLVGSEAQRLK
QECLENPDYTVLTATAKVKPRRSSFGGFGSLRRRRQDDGEDYVCPMNVEMPKSSSFQRNV
YVYEETFDPMEQMEDSEGTVRQIGAFSEGINNLTSMLKEDELFQVISVCPTEDKTEVLNS
ST
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccatggctgcctgggctgcggaaacacggcctgctggattgagaggaagatg
atgtcagacgccagtgagatgttggcagcagccttggagcagatggatgggatcattgca
ggctccaaggccattgattacaccaatgggctgtttgactgccagtcgccaacttctccc
ctcctgggtggcttcagggttcttcacctcctggaggacctcagagctgcgctggagctg
atggacaacgaggaacgggacaacctgcgctgtcagatcccagattccactgcagaggga
cttgctgggtggctgcatggaagaatgaccaacgtccacagctctgaggcagtctatcaa
gagcgtctttcacggctggagagcgacaaagaatgtcttattcttcaggtcagtgtgcta
acagaccaggtggaggtgcagggagaaaagattcgggatttggacaaaagtttggagctt
catcgggaaaagctaaatgctgctgaggagctacttcaacaggagctgttaaaccggaca
gcgctggagacccagaagctggaattgatgaccgaggtgtcgagcctgaagctgaagctg
actgctttggagagagaccacaggggcaacgagggtttgtaccaggaagtgacagacctg
aggtttaggatgacggacatagagaatgaaagactgcagtgtgagaagaaactaaaagga
gccaaagaggagctgcatgatctgcagaggcatctggaggagcaggacgaggaactaaga
aggttgaagggggaggcccacaacagaattactgggggagagagagatacagaggtggtg
aagatgaagagggtgttggagctgctgacatcggagaatgatgagaaggagaggaggatt
aaagagctcgaggagtcgctgacgaagtgcaggagagtgcaggagttggtcagagagaag
ctaaaagaagatgactacgccgatatcacagatgatccctcgctttccgtgtccatggag
gtggatcaggtcaccctggagttggagggggagacaggaaggagctgcgatgagtcaata
ccttgtatagctgtcctttctgaaatgaatgagctggacagagaacgacagctacaagca
gcagaaagctccgtagatgatccacaaagcgacggttcagctgtaaccagcagcactgag
caggttaaaagagaagcaggatccagttcttcttccaagggaaaaactaacgatgggagt
tttggcagcaagagggtccgtgcctcatttggccgcggcttttttaagctacgtggaggc
aaacagacggctggctcatcagaccttgccgaggcagaacgtaaaggcactgagcacctc
gacctcgcaggtgttcctccccaaaaatcccaccgcgccgctcctctcccatcatctcct
gaagccaagaagaagtcgagcgggttgaggaaattctttggcagattgaagaggagccac
tccacctcattcaacccggatgatggagctgagacggagttcaggaggggcggagtcaga
gccacggctggtcctcggctcggctggtcacgagactcaaagcacaaagctgtggacact
cctttcgctcggtggagtaaagaggacgtttttgcctggctacaggagcaggggctcggc
ttgtatgcagctcagggacagaactgggtcaaatcgggacaaactttattgcaggcgtca
caacatgatttggaaaaggagctgggaatgaagctgcctctccacaggaagaagctgcag
ctcgccctccaggcgctctcctcagagggagatgaccttcagggcaaactggaccacaac
tgggtcaccaggtggctggatgacatcggcctcccgcagtacaagagcaacttcgatgag
gctcgagttgatggacgcatgttgcactacatgacagtggaagatctgctgtctctgaag
gtggggagcgtccttcatcacctcagcatcaagagggccatccaggtcctgcgtctgaac
tcctatgacccaaactgtctgagacgtcgcccctctgatgagaacaacatcacaccggct
gagatctcccagtggaccaaccacagagtgatggagtggctccgctccgtcgatctggcc
gagtacgctcccaacctcagggggagcggagttcatggaggactaatggtgttggagccc
cgattcaatgtggaagcgctcgccctcctgctcaacattcctcccagcaagaccctgttg
agacgccacctggctacacacttccacctgctagtcggctctgaagctcaaaggctcaaa
caggagtgtctggaaaacccggattatacggtcctcacagctacagctaaagttaagcca
agacgttcatcttttggtggtttcggctccctgaggaggagacgtcaggacgacggggag
gactacgtctgtccaatgaatgtggagatgccaaagagcagcagcttccagaggaacgtc
tacgtctatgaggaaaccttcgaccccatggagcagatggaagattccgagggaaccgtc
aggcagattggagcgttctcagaaggaatcaacaatctgacgagcatgctaaaggaagat
gagctcttccaggtgatctcagtttgccccacagaggataaaacagaagtgctcaactcc
tccacctga
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