Cyprinodon variegatus (sheepshead minnow): 107085691
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Entry
107085691 CDS
T06110
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107085691 (ssrp1)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107085691 (ssrp1)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107085691 (ssrp1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107085691 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
107085691
NCBI-ProteinID:
XP_015231657
Ensembl:
ENSCVAG00000020346
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MGDMLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSNKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKISEFFKVNYKVELSEKDLSVKGWNWGTAKFSGPLLS
FDVNDNTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDGSGS
DESFNPGEEDEEIAEEYDSNASASDSSEEGEDSEDESAKKKKAKKPKVVKEKKERKPRKE
KKQKDTGGPKRPMSAYMLWLNSSRERIKAENPGISITEISKKAGEMWRQLGKDEKEEWET
KAGEAKRQYDKLKKEYKESGGAVSSPRKEKRKSGGKKDEDKKRKSSGGDKEKERGGNESF
KSREFIETSEDSSSDSDHKSKSKKKKKKESEEEEEEAASTPASSEEESD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctggagtttaacgacatctaccaggaggtcaaaggctcttggaatgat
ggacgcctgcgcttcagcaaacagaatgtagtttataagagcaacaagactgggaaggtt
gacagcatcccagcaggagagctcaacctcgctcagtggaggcgagtgtgcttgggccat
ggcatcaaacttggcaccagcacgggccacatttacaaatatgacggtttcagggacacg
gattttgagaagatatcagagttttttaaggtaaactacaaggtggagctgtcagagaaa
gacctgtctgtgaagggctggaactgggggacagccaagttctcaggacccctgctgtcg
tttgacgtcaatgacaacacagcgtttgagatccccctgtccaacgtctcccaatgcgcc
acagggaagaacgaagtcacgctggagtttcaccagaacgacgacacggaggtctctctc
atggaggtccgattctacgtcccgcccagccagaccgatgaacgacaagaccctgtggag
gcgtttgcccagaatgttctgtctaaggctgatgtgattcaggccacaggagacgcagtt
tgtatctttaaggagcttcagtgtctcacacccaggggaagatacgacattcggatctat
cccactttcctccacttgcacggtaagacttttgactacaagattccctacaccaccgtt
ctccgtctcttcctgctgccacacaaggaccagaggcagatgttcttcgtgatcagtctg
gatcctcccatcaagcaggggcagactcgatatcatttcctcatcctgcttttttcaaag
gaagaggatattagcctcaccctcaacatgagcgaggaggatgtggaaaagcgttttgaa
ggcaaactcagtaaaaacatgtcgggctctctctacgagatggtcagcagggtgatgaag
gccctggtcaaccgcaaaatcactgtacccggaaacttccaaggccactctggtgctcag
tgcatcacctgctcctacaaggcatcatcaggcctcctttatcctctggagaggggcttc
atctacgtccacaagcccccagttcacctgcgctttgaggaaatctcctgcgtcaacttc
gccagaggaaccactacaaccaggtcctttgactttgagattgagacgaagcaaggaaac
cagtacaccttcagcagcattgagagggaggagtatggcaaactgtttgactttgttaac
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaagggcaag
atagacgagtacagtgactccgatgaagaccagcatgatgcctacctggagagaatgaag
gctgagggaaagatcagggaggaaggcaacgacagcgatgattcagatggaagtggaagt
gacgagtctttcaaccctggggaggaagatgaagaaattgcagaagagtatgacagcaat
gcttcagcaagtgacagcagtgaagaaggcgaagatagcgaagacgaaagcgcaaagaag
aaaaaagccaagaaacctaaagtcgtgaaagagaaaaaagaaaggaaaccacgcaaagag
aagaagcagaaggacacaggaggtcccaaaaggccgatgagcgcctacatgctttggctg
aactccagccgggaacgcatcaaggcagagaaccccggcatctccatcacagagatatcc
aagaaggccggagagatgtggagacagcttggcaaagacgaaaaggaggaatgggaaaca
aaggcaggggaggcaaagaggcaatatgacaaactgaagaaggagtacaaagaaagtgga
ggagctgtctctagtcccaggaaagagaagagaaaatcgggtggaaaaaaggacgaagac
aagaagagaaagtccagtggtggcgacaaggagaaggaacgggggggcaacgaaagcttc
aagagccgagagttcatcgaaaccagcgaggatagctcctcagactccgaccacaagagc
aagtccaagaagaagaagaagaaggaatcagaggaagaggaggaggaagctgcttccact
cctgccagctcagaggaggagtctgactga
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