KEGG   Cyprinodon variegatus (sheepshead minnow): 107085713
Entry
107085713         CDS       T06110                                 
Symbol
polq
Name
(RefSeq) DNA polymerase theta isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107085713 (polq)
Enzymes [BR:cvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107085713 (polq)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    107085713 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc
Other DBs
NCBI-GeneID: 107085713
NCBI-ProteinID: XP_015231687
Ensembl: ENSCVAG00000019651
LinkDB
Position
Unknown
AA seq 2699 aa
MMTPGPLKKKTYLGQHQIKKKISIPGKNETPDREKLLQKTSGKTDRSQRVNEDGLKDGGA
QLLPGESTLALDEEMLQVLDVVDLSKGEVKGDVMRRQYADGFSPPQPIIQTTNSKMDRNN
MKIDRKTLIYTHEGENPQQRGCGSKGESYRPGWRVDCKDLAQRLLFSEDSGEVGPSKGNE
QNNHPNDAPAPFSALACKATHSSQNAGSSDNYRQNLRRSSSPLSDRDTSSKNTSPPLDAS
RDYILFSPTRLAAARQRAKLQQSLQNQSTSVLTVPSGLELSTLSDTLPPPGVALCAPDQQ
AEKLLLSSWGLPKPVLERYQKHGVTRMFEWQAQCLTVGQVLHGGNLVYSAPTSAGKTLVS
ELLILKRVLETKRKALFILPFVSVAKEKMHYLQSVFEEAGIRVEGYMGSTSAAGGFSTLD
VAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIGQKQN
TSGSLSGGVQIIGMSATLPNLSLLAGWLGADLYQTEFRPVPLQEHLKVGCNIYDRSLSVV
RQFVPALDIKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADTIARAFYNLRHTDLQ
GKAGPQPVCLDPEGLVDVIAQLRRTPAGLDPILQRTVPWAVAFHHAGLTFDERDVLEGAF
RQGLIRVLAATSTLSSGVNLPARRVVIRTPTFNGRLLDPLTYKQMAGRAGRKGVDTTGES
VLVCKQNERQKGMSLLKGDLQPISSCLVRKEGEGVTTSMLRAILEIIVGGVASTPQDVRL
YASCSLLAASMKSDARKESDEETSSGAIEACVEWLMGNEFISIKKDGQDEQYCPTQLGSA
TLSSSLSPPEALGIFADLQRAMKGFVLENNLHILYLVQIKYLYIKTLASKECTKSCYKSF
NLTTFIYFQITPLYAEWTTIDWYQFFCLWEQLPSSMKRVAELVGVQEGFLARSVSGKVVA
KTDKQLRQMAIHKRFFTTLVLQDLVSEVPLGTVASKFNCNRGQLQSLQQSASTYAGMVTV
FCKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRISLLNATRARALYAQGLCTVAEVAQA
TVAVVEKALRNAVPFKSSKRAADESEMEAAERRNLRCVWVAGGRALTEQEAAAEIVSEAR
LLLQEDLAQLGVHWDPSTLPPQASSENSTDDHPSGDSSAANSSPQRLQMEKTEVHQTPKQ
EAKRKAREANVEEINTDAITEKRIADGRCFLREAKKKNVMEVMVKRSEERIKVKPSTSIQ
DDVGLPEKTEENRGSLQEEEKKENIKTPEKEKSKTDESVGEEKDDYLNEPAAERSLTQEL
AQILSSPLPQGPPQPQAPSSPTPPPRFRAPMSHTTQQPRASTNTANGVFLTSPLQPDRLK
HSVALSKVLQSIQTDRGLQDESEQVERLRLKATNSVPVNQSPTTLQGNSDDVSTPADVDM
SHSPPSAPLLTPLAKRRRVEAREVDTFSSPELYAGSRTEEEGGAEEESFSDSLDLDTQTE
RILVQNAFTGVAGGTDQVVEHQGVQQEEPATEAENDGRDEAKGAEMSSPTFNISVTESQM
ELILNTDHRVSPSPAGRGNNQDEEDNITDTNNAASESPNRSSSFLFDSMYYSPLLDAPEP
AGEVESASLGGAPSAQQRRRSELLANQEAEEQEAVQWGESFLNLSEWGDALLVGEHFLER
QSLSRRPEENQELQPPNREEDLVLRCQNEPDEEKAGNNQPCNQNDNSSTDEDLDEGRTTQ
QVEKRSNEKEEKCVFRPPHVQNFPESAVYCSPGLQEIFDRWPSMSDPPGSGNSQIQAASA
AATSTESPQAAVQPDKKREHSQQADEAQEIRLPERPGSASDLVPPTQEAAPVTPRIKLTT
SSVSSPVVAQPLKRSTPSIRPPERSADEKYATPHMQSNCLAPAVSFFDDRSEKNTPVARI
FLPPESLTSPPPPQPKPPSDTESSVSPEGFTLQLSQDASLCCSNSGSFTIIDVASDCRLF
DTFIKEWKTKERFSVALACEKKECRQQLEDEIGGKHKRASAALQKLDGFPVRDEEDLTLI
GLSVCWGARDAYYISLQQDQSKGLSSSLAPPPLDDALPVSKRLEQVKACLGGQPTGVERP
VVSVYDIIKVYKRLVLSCGISLEGNCEDPKVACWLLDPGSEERTLPNMVTVYCPEELPLL
DGLGNAHSFCPRVRAATKSVLTHALMSHLSGLLEQDGLLDMFRRIEMPSQVCLALLELNG
VGFSVEECERQKHVMQAKLSELEAEAYSLAGHSFSLTSVDDVAQVLFLELHLPPNGDLGG
TRNKKTLGYTRRGGGRVRLGKQFSTTKDVLQKLRPLHPLPGVILEWRRITNALTKVVFPL
QREKQYHPILDMDRIYPIAQTHTATGRVSFTEPNIQNVPKDFEISMPTVVGESPPSQNGF
QKANKPGKRRNSMVPRPTAASAEQGPAFSVSMRHAFIPFSGGMILAADYSQLELRVLAHL
SKDQRLLQVLNGGADVFRCIAAEWKSVDPESVQDSLRQQAKQICYGIIYGMGAKSLGEQM
GVEENDAACYIESFKARYKGINAFLKQTVKKCLKDGYVQTLMGRRRYLAGITSTNPHIKA
HAERQAVNTTVQGSAADIVKLATVNIQKRLRKTFPAAPLSHQHANPAPNKRRIGLSWLRG
AYLVLQLHDELIYETTEQDLIQVAQIVKREMESAVKLYVKLKAKVKVGPSWGNLQDLDI
NT seq 8100 nt   +upstreamnt  +downstreamnt
atgatgactccgggtcctctgaaaaagaagacttacctaggacagcaccagatcaagaag
aaaatcagcatcccaggcaaaaatgagacaccagacagagaaaaacttctacagaaaaca
tcaggcaaaacagatagatcacagagggttaatgaagatggccttaaggatggaggagct
cagcttctaccgggggaatccaccttagctctggatgaagagatgctgcaggttctggat
gttgttgatctttctaagggggaagttaagggagatgttatgagaagacagtatgcagat
ggattttctcctccacaacccataatacagactacaaacagtaaaatggacagaaacaat
atgaaaatagacaggaaaacacttatttacacacatgagggagagaacccccagcagaga
ggctgtgggtctaaaggggaatcttacagaccaggatggagagtcgactgcaaagacctg
gctcagaggcttctcttcagcgaggactctggtgaagtaggtccctctaaggggaatgaa
cagaataaccatcccaatgatgctcctgcccctttcagcgccctggcatgtaaagccaca
catagcagtcaaaatgcaggcagctccgacaactacagacagaatctcaggagaagtagc
tcacctctaagtgacagagatacctccagtaagaacaccagtccccctctggatgcatcc
agggactatatcttatttagtcccacccgtctagcagcagccaggcagagggcaaaactt
cagcagtcgttacagaatcaatccacctctgttctcacggtgcccagtggtctggagctc
agcacactcagtgacacacttcctcctccaggtgttgccttgtgtgctcctgatcagcag
gctgaaaagctgctgttatccagctggggattaccgaagcctgtcttagagcgctaccag
aaacacggagtcactcggatgtttgaatggcaggctcaatgcctcactgttggacaggtc
ctgcatggggggaaccttgtgtattctgcacccaccagtgccggcaaaactctggtttcg
gagctgctgatcctaaagcgcgtgctggagaccaaaagaaaagcacttttcattttgcct
tttgtttctgtggccaaagaaaagatgcactacctccagagcgtgtttgaggaggctggc
attcgtgtagagggctacatggggagcacatcagctgcaggaggtttctctacgctggat
gtggctgtttgtaccatagaaaaagccaattctttaattaatagactgattgaagaagat
agcatgggtctactaggcatggtggtggttgatgagttgcatatggtcggggattctgga
agaggatacctgcttgaactgctcctaaccaaaattcgctatatcggacagaaacagaac
acatcaggctctctttcagggggtgttcagatcatcggtatgagtgccactttgcctaat
ctctctctgctggctggttggttgggtgctgacttataccaaacagaattcagacccgtc
cccctgcaggaacacctcaaagtgggatgtaacatatacgacaggagcctttccgtggtt
cgacagtttgttcctgctctcgatattaagggtgatgacgatcatattgtgagcttgtgt
tatgagacggtgagtgaaggccactccgtgctgctgttctgcccctccaagaactggtgt
gaaaagctggccgacaccatcgccagggccttctataacctgagacatacggatctccag
ggcaaagctggtcctcagcctgtttgtctagatccagagggcttagttgatgtcatagct
cagctgcggcggactccagctggtcttgatcccatcctacagcgcaccgttccttgggcc
gtggccttccaccacgctgggttgacgtttgatgagcgtgacgtgctggagggagcgttt
cgacagggattgatcagagttctggccgccacctccaccctttcatcaggagttaatctc
ccggcccgcagggtggtcattcgcactccaacttttaatggacgcttgctggacccactc
acatacaaacagatggctggacgagctgggagaaaaggagttgataccacaggtgaaagt
gttcttgtgtgtaagcagaacgagcgtcagaaaggtatgagtcttctgaaaggagatctt
cagccaatcagcagctgcctggtcaggaaggagggcgaaggtgtgaccaccagcatgctc
agagccatcctggagattattgttggaggtgtcgccagcaccccgcaggatgtgaggttg
tacgcgtcgtgctcccttttagctgccagcatgaaaagtgacgctagaaaagaatcggat
gaggaaaccagcagtggagctattgaggcttgtgttgaatggctgatgggaaacgaattt
attagcattaaaaaggatgggcaagatgaacagtactgtcccacccagctcggttctgcc
actctttcttcatccctctctcctccagaggctttggggatatttgcagatctccagcga
gccatgaaaggatttgtacttgagaataatttacacattctgtatctggtacaaataaaa
tacctttatattaagaccctagctagcaaggaatgcaccaaatcctgctataaatcattt
aatttaacaacctttatatatttccagatcactccgctgtatgctgagtggaccacaata
gactggtatcagtttttctgcctgtgggagcagctgccgtcttcgatgaagcgagtggca
gagctggtcggtgtccaggaaggctttcttgcacgatctgtcagcggcaaagttgtagcc
aagacagacaagcagctcagacagatggccattcataaaaggtttttcacaactcttgta
ctccaggatctggtcagcgaagtgcctctgggaaccgttgcatccaagttcaactgcaat
cgaggacagctgcagtctctccagcaatctgcttctacgtatgcagggatggttactgta
ttctgcaagcgtctgggctggcacaacatggagctcctgttgtctcagtaccagaccaga
ctgagctttggggtccagcgggagctcgtcgatctggtcaggatttcccttctcaatgca
acgcgcgccagagcgctctacgcccagggtctctgcactgtggcagaagtggcccaggcc
acggtggctgttgtggaaaaagctttgcggaacgcagttccattcaagagttcaaagaga
gcggcggatgagagcgagatggaggcagcggagaggcgaaacctgcgctgtgtgtgggtc
gccggcggacgggctctgacagaacaggaagcagctgctgagatcgtttctgaggccagg
ctcctccttcaagaggacctagctcaacttggagttcactgggatccatcaactcttcct
ccacaggcttcctctgaaaatagcaccgatgatcacccaagtggggattcgtctgctgct
aattccagcccacagcgtttacaaatggaaaaaactgaagtgcatcaaacgccaaagcag
gaggcaaagaggaaagcaagagaggctaatgtggaggagattaacacagatgcaataacg
gagaaaaggattgctgatgggagatgctttttacgagaagcaaagaagaaaaatgtgatg
gaagttatggttaaaagatctgaagaaagaatcaaagtgaagcccagcacatcaatccaa
gatgatgtcggacttccagagaaaacagaagagaacagagggagtctacaagaagaggaa
aagaaagaaaatatcaagacaccagaaaaagagaagagtaaaacagacgaatcagttgga
gaggagaaggatgattatttaaatgaacctgctgctgaaagaagcttaactcaagagttg
gctcagattctatccagccctctccctcaggggcccccacagcctcaggccccatcctct
cctaccccaccccccaggttcagagcccctatgtcccacacaacccaacaaccaagagct
tccacaaacacagctaatggagtcttcttaacatcccctctgcagccagacagactgaag
cactcggttgcattaagcaaagtcctgcaatcaatacagactgacaggggtctgcaggat
gagtcagagcaagtcgagaggttacggttaaaagccacaaactctgtgcccgttaatcag
agtcccacaactcttcaaggaaactcggatgatgtttctacgcctgcggatgtagatatg
tcccattcccctccgtctgctcccctgttaactcccctggccaaaagaagacgagtcgaa
gccagagaggtggatacattttcctctccggagctgtatgcaggcagtaggactgaggaa
gaggggggtgcagaggaagaaagtttcagtgacagcttggacttggacactcagacagag
agaattcttgtccaaaatgcgttcactggtgtagctggagggacagatcaggtggtagaa
catcagggggtccaacaggaggagccggcaacagaagctgaaaatgatggaagagatgaa
gctaaaggcgctgagatgtcatctcctactttcaatatttcagtaacagagagccagatg
gagctaatccttaacacagaccacagagtatctcccagtccagctggaagaggaaataac
caagacgaagaagataacataacggacactaacaacgctgcatcagaaagtccaaacaga
agcagtagcttcctgttcgacagcatgtactacagccctctgctggatgctcctgagcca
gcaggtgaggtagaatctgccagcttgggcggcgctccatctgcccaacagagacgacgc
agtgagcttctcgcaaaccaggaggcggaggaacaggaggcggtccagtggggcgagtcc
ttcttaaacctgtctgagtggggagacgctctcttagtgggtgaacactttctggagagg
caaagtttgtcgaggcgacctgaagaaaatcaggagctacagccaccaaacagagaggaa
gatctcgtgttaaggtgccaaaatgagcctgatgaggaaaaggctggcaataatcagcct
tgcaatcaaaatgataactcctctactgatgaggatttagatgagggccgaactacacaa
caggttgagaaaagaagcaatgaaaaggaagaaaaatgtgttttcagacccccacatgtc
caaaacttccctgaaagtgctgtttattgtagccctgggttacaagaaatctttgaccgc
tggcccagtatgtctgacccaccaggctctggaaactcccaaatccaagctgcctctgct
gctgctacgagcacagagtcaccacaggctgcagtacaacctgacaaaaagagggaacat
tcccaacaagccgatgaagctcaggagatccgactcccagagagaccaggttctgccagt
gacctcgttcccccaacacaggaagcagctcctgtcacaccaagaataaaactcaccacc
tcctctgtcagctcacctgtcgtcgctcagcctcttaaacgctccactccctcaatccgt
cccccagagagatcagcagatgaaaaatacgccacacctcacatgcagagcaattgctta
gcgcctgctgtttcgttttttgatgatagatcagagaaaaacacgccggtggcacggatc
ttcctccccccagagagtctaacgtctccaccaccaccccaaccgaagcctccgtctgac
actgagtcctcggtcagtcctgaaggcttcactctccagctgtcccaggacgcttcgctc
tgctgcagcaactctgggagcttcaccatcatagacgtggcgagtgattgccgccttttt
gatactttcataaaagaatggaagaccaaagagcggttctctgtggctttggcctgtgag
aagaaagagtgcaggcagcagctggaggatgagataggaggaaaacataagagagcatca
gcagctcttcaaaagcttgatggttttccagtaagagacgaagaagaccttactctgatt
ggactatccgtctgctggggagccagagatgcatattacatttctctgcagcaggaccag
agcaaaggtctgagctccagtctggctcctcctccactggatgatgctctgccggtaagt
aaaaggctggagcaggtgaaggcctgtctgggtggacagccaactggtgtcgagcgccca
gtggttagtgtgtatgacatcatcaaggtgtacaagaggctggtactgagctgtggcatc
agcttggagggaaactgtgaggatccaaaggttgcatgctggctgctggaccctggaagt
gaggaaagaacccttcccaacatggtgaccgtctactgtcctgaagagttgcctctgctg
gatggtcttgggaatgcacactcattctgtccaagagtcagagctgccaccaagagtgtg
ctcacacacgctctgatgagccatctctcaggcctgctggagcaagatggcctcctggat
atgtttaggagaatagagatgccctcccaggtttgtctggctctgctggaactgaacgga
gtcggcttcagtgtggaggagtgtgagagacaaaaacacgtgatgcaggccaaactgtca
gagctggaggccgaggcctacagcctggctggacacagcttctccctaacaagtgttgat
gatgttgcacaggtgctgtttttggagctgcatctgcctccaaacggcgacttgggtgga
acaagaaataagaagactctgggttacaccaggcggggcggcggcagagtgcgactgggg
aagcagttcagcaccacaaaggatgtcctgcagaaacttcgtcccctccaccctttgcca
ggtgtaatcctggagtggcggcgaatcaccaacgcattgactaaagtggtgttccccctg
cagagggagaagcagtatcatccgatactggatatggacagaatataccccatcgcacag
acccacacagctacaggtagagtgagcttcacagagccgaacatccagaacgttcccaaa
gattttgagatttccatgcctacagtggtaggagagagccctccttcacaaaatggattc
cagaaagctaacaaaccaggaaagaggaggaactcgatggttccacgtcccacagctgca
tctgcagagcaaggcccagccttctccgtcagcatgagacatgcatttattcctttttca
ggtgggatgatactggcggctgattactctcagctggaactgagagtgctggctcacctt
tctaaagaccagcgcctcctgcaggtactgaatgggggagctgatgtgtttcgctgcatt
gctgctgagtggaaaagtgtggacccggagtctgtgcaggacagcctcagacaacaggcc
aaacagatttgctacgggatcatctatggaatgggagcaaaatcacttggggaacaaatg
ggagtggaagagaacgatgcagcctgttacatcgagagtttcaaagcaagatacaaaggg
atcaacgcttttcttaaacagacggtgaagaagtgtttaaaggatggctatgttcagacg
ctgatgggccgaaggagatatttagccgggatcaccagcaccaatccacacatcaaagct
catgcagaacgacaggcagtaaatacaacggttcagggatcagcggcagacatcgtcaaa
ctggctacagtcaacatccagaaacggttacgaaagacttttcctgcagcaccgctgtct
caccaacatgcaaacccagctcctaataagcgcagaattgggttgtcttggcttcgagga
gcctacttggtcctacagctgcatgatgagctcatttatgaaaccacagaacaggatctc
atacaggttgcacagatagtaaagagggagatggaatcagcagtcaaactgtatgtgaag
ctaaaagctaaagttaaagttggacccagctggggaaacctgcaagacctcgatatatga

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