Cyprinodon variegatus (sheepshead minnow): 107085732
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Entry
107085732 CDS
T06110
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107085732 (pax5)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
107085732 (pax5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
107085732
NCBI-ProteinID:
XP_015231732
Ensembl:
ENSCVAG00000019366
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDQGPRSPALRLGRAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
ERVCDNDSVPSVSSINRIIRTKVQQQPGQTGSVSAHSLATSVASTQVSAVTSDSAGSSYS
ISGILGISSAADVGKRKRDEVLQESPLANGHGHSGRDFLRKQMRGELFSPQQIEVLDRLF
DRQPTCPIQTTTELYLSPDAGKTSDYSAMASLAGGLDEMKNSLANPGTGTELGSNVSGPQ
SYPLVPGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYSHPQYSTYNES
WRFPNPSLLVFQQDYGSLLGTEIGCSSSLFTSQAGQMQGSPYYYSATSRGAGPAATATAS
AYDRH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggggccaaggagtcctgcgctgcggctggggagagcaggacatggtggggtg
aaccagctcggaggcgtgtttgtaaatggcagaccccttccagatgtggtacgacaacga
atagtagagcttgcccatcaaggggttcgaccctgtgacatctcaaggcagctgcgggtc
agccacggatgcgtcagcaagatattgggcaggtactatgaaacaggcagcatccgccct
ggggtaatcgggggatccaaaccaaaggttgctacacccaaagtggtcgacaagatcgcc
gattacaaacgccaaaatcccaccatgtttgcctgggagattcgggacaggctcctggct
gagagagtttgtgacaatgacagtgtccccagtgtcagctccatcaacaggatcatacgg
actaaggttcagcagcaacctggtcaaacgggctcggtgtcggctcacagcttagcgacg
tccgtagcttctacacaggtttcagcggtcactagcgactctgctggctcatcgtactca
atcagcggcattttgggaatcagctctgctgccgacgtgggcaagaggaagagagatgag
gttttgcaggagtcaccactggctaatgggcatggtcacagtgggcgggacttcctcagg
aagcagatgagaggggaattgttctcgccacagcagatcgaggtattggaccgcctcttt
gacagacaaccaacctgtccaatccaaaccaccactgagctctatctgagccctgacgct
ggcaagacatcggactactcagcaatggcttctttagcaggcgggttggacgagatgaag
aacagtttggccaatcctggcacagggacagaactaggatccaatgtatccggaccacag
tcttaccctcttgttccaggtcgagatttagccagcacaactctgccaggctaccctcct
catgtccccccaactgggcagggcagctactctactccctctctcactggcatggtacca
ggaggagatttttctgggagtccttattcccacccacagtattccacgtacaatgaatca
tggagatttccaaaccctagcctattagtgtttcagcaggattatggttctctcctgggg
acggagatcggctgctcgtccagtctcttcaccagtcaggcaggacagatgcaagggtca
ccatattattatagtgcaacgtcacggggggcaggccctgctgccactgcaacagcctct
gcctacgatcgccactga
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