Cyprinodon variegatus (sheepshead minnow): 107085872
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Entry
107085872 CDS
T06110
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107085872 (sgce)
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Paralog
GFIT
Motif
Pfam:
Sarcoglycan_2_C
Sarcoglycan_2
Het-C
Motif
Other DBs
NCBI-GeneID:
107085872
NCBI-ProteinID:
XP_015231977
Ensembl:
ENSCVAG00000015254
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MSAAAVAVLLGAVVHVVHAHDETLSDFHERKVVSEQAMALLQRRTLNKDVITILSRCHAE
RNVYPSAGVLFVHVLEREHFKGEFPPYPKSGVSPGDASNDPITFNTNLKGYPDRPGWLRY
IQRTPLGDGVLYGSPTAEHVGKPTVIEITAYNRRTFETARHNLVINIMATEEFPLPYQAE
FYIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINNLKEGVY
VMVGADVPFSSCLREVENPHNQLRCSQEMEPVISCDKKFRAQFHIDWCKISLVDINKVVP
VYITRPDPGTGILPEFGEYNPPSESLKSRDYFSDFLVTLAVPAAVAVVLFFILGYTMCCR
REGVEKRNMQTPAIQLVHHSAIQKSTKELRSMSKNREISWPLSTLPVFNPVSGEVVPPIH
PDSYETTSMPLMQTQTNLQNQITIPQQRPSGDNYVMSTFRRLEVNGIPEERKVAEALNL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcagctgtcgcggtgttgctcggagcggttgttcacgttgtgcatgcccat
gatgaaacactcagtgattttcatgagagaaaagtcgtttcggagcaggccatggctttg
ctgcaaagaagaaccttaaacaaagacgtcatcaccatcctgtcaagatgccacgcagaa
cgtaacgtctacccatctgctggagttctgtttgtccatgttctggagagagagcacttc
aaaggagagtttcctccttaccccaaatcaggcgtctccccaggtgatgccagcaatgat
ccaatcacctttaacaccaacctgaaaggctaccccgacagaccaggctggctgcgctac
atccagaggactcctctcggcgacggcgtcctctatggttctcctaccgcagagcatgtt
ggaaagcccactgtgatagagattactgcctataacagacgcacgtttgagacggcacgg
cacaacctggtcattaacatcatggcaacagaagagttcccgctgccttaccaggctgag
ttttacatcaaaaacatgaacgtggaggagatgctggccagtgaggtgctgggagacttt
ctgggtgcagtgaagaatgtgtggcagcctgagcggctcaatgctatcaacattacctct
gccctggaccgcggcggccgcgtgcctctgcctatcaacaacctaaaggaaggtgtatat
gtgatggttggtgcggacgttcccttctcatcgtgcctgcgggaggtggagaacccacat
aaccagctgcgctgcagtcaggagatggagcctgtcatcagctgtgacaagaaattcaga
gctcagtttcacatcgactggtgtaagatctccctggttgatatcaacaaagtggtccct
gtgtacatcacccgccctgatccgggcacaggaatactccccgagttcggggagtacaac
cctccgtcagagtctctgaagagccgcgactatttctccgacttcctggtaacgctggct
gttcctgccgctgtggcagtcgtcctcttcttcatcctcggctacaccatgtgctgcaga
cgggaaggggtggaaaaaagaaacatgcaaacaccagccatccagctggttcatcacagc
gccattcagaagtccaccaaggagctacggagcatgtcaaagaaccgcgagatctcctgg
cctctctccaccctgcctgtcttcaacccagtcagcggagaggtggtgccgcccatacac
cctgacagctacgagaccaccagcatgccactcatgcagacacagacgaatttgcagaat
cagatcacgataccacagcaaaggccgtcaggagataattatgtcatgtcgacgtttcga
agactggaggtaaatggtatccctgaagaaaggaaggtggctgaagcacttaacctatga
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