Cyprinodon variegatus (sheepshead minnow): 107085878
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Entry
107085878 CDS
T06110
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107085878 (snx13)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107085878 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
DUF6395
Motif
Other DBs
NCBI-GeneID:
107085878
NCBI-ProteinID:
XP_015231989
Ensembl:
ENSCVAG00000014434
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MFKVRLRRVSTFLRQSQASLSVWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVT
LLYGKINSEKHLEKCEHSFLPPTQIGIQKTLDDMKLEVKPIKIDRRLTGSSFIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLADREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDL
CELLLYLLLPPGDFHNKSMRYFLREVLAYGVLLPLINQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKPAELEAVKDKVIEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLQSGKEVDALKLAASFGKLCIIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVE
GYRVTAQQQLEVMLGWQKDGKKQPGATKGLLKAAALGVYEQYLSEKASPRVQVDKELVTK
LGEKLQKEDPTPDIFDEVQRKVYEMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGS
DDGDGESFNGSPTGSLNLSLDDLNNSCHDEFLQLHAFISDTADSFLPGFWGATGVCNDHG
KTYALYAITVFRRNPDGSEDCWKTYRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNM
DRDFLEKRKKDLNAYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVN
PLRSSMRNVSNAVKSLPDSLAEGMNKVSDNMGRMSERLGQDIKQNILKVPPLLPKSDIDP
EHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTIN
RKIVDHVDYMTSPEQVADYVKKFRDSYWPNGILAETPPRRDKCIRMRTRVAAKTSLLGIM
PDELKHIIGADTTRKGILRVFDMFQHQPMNRRLVYVFLEGFLETMFPQFKFPELFVKLHS
RSPRIHRYNQKLKCSSLKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggtccgtcttcggcgagtttctacgtttctacggcagtcacaggccagtctg
tccgtctggggatgggggggtcttggagttgtgctgttctttgtcacgtttggacctttt
gccattttctacctggccttttatatcttttgcttcattggaggtggctttgcagtcact
ttgctgtatggaaagataaactcagagaaacacctggaaaaatgcgaacactctttcttg
ccaccaacacaaattggtatacagaagacgctggatgacatgaagctggaggtaaagcca
ataaagattgacaggagactaactggatctagtttcattgatgaaccactacagcaggtg
atccagtttgctcttagagactatatccagtactggtattacactcttagtgaagatgag
tcctttttgctagaaatcagacaaacgttacagaatgccctcatccagttctccacacgg
tccaaagaggtggactggcagccttacttcaccacccgcctggtggacgacttcgccacc
catttacgtgtctttagaaaagcccaggatcgcctcgcagacagagaggacaagcaaagg
gacattacagatgagcttgttgactcattttttgaggctgaagtggagatggaaagaaaa
atttgtagagacgtagtttgcacatcacacaaagatgaagaaggttttcttcgagacttg
tgcgagttacttttgtacctgttactacctcctggagacttccacaacaaaagcatgaga
tacttcctgagggaggtgctggcatatggggtacttctccctctgatcaaccagctgagt
gacccggactacatcaaccagtttgtcatctggatgattcgggactccagttgcaactat
gaagccttcatgaacatcttgaagttaacagacaagcctgccgagctggaagctgttaaa
gacaaggtgattgaggagctgcagtatctccgctccctggacacggctggagatgacatc
aatgtgatcaaaaaccagattaacagtctgctgtttgtgaagaaggtgtgtgagaccaga
atccagaggctgcagtcagggaaggaggtcgatgccctgaagctggcagccagttttggc
aagctgtgcattatcccactggaccacatccttgtccacaacatagctctccagttcttc
atggacttcatgcaggcagcaggggctcaggctgagctgtttttttggctcactgttgag
ggctacagggtgactgcccaacagcagctggaggtgatgctgggctggcagaaggacggc
aagaagcagccgggggccacaaagggccttctgaaggcggctgcactcggggtttatgaa
cagtacctttctgaaaaggcatctcccagggttcaggtggacaaggagctggtaacaaag
ctaggagagaagctgcaaaaagaagaccccacacctgatatatttgatgaagttcagaga
aaagtgtatgaaatgatgctacgtgacgagcgcttctacccatccttcaagcagagtccc
ctgtatgtccgtatgctggctgagctggatatgctgaaagagccgagctacagaggatct
gatgacggcgatggagagtctttcaatggttcacctacaggaagccttaacctgtctctg
gatgatctgaacaactcctgccatgatgaatttctgcagctacatgccttcatatctgac
actgctgattcttttcttcctggcttctggggtgccacaggggtttgcaacgatcatggt
aagacctacgcactttacgccatcaccgtgttcagacgcaacccagacggcagcgaggac
tgctggaagacgtaccgtcgctactcggacttccatgatttccacatgagaataacggag
cagtttgagaacctgacgtcgatcctcaagcttccaggaaagaaaactttcaataatatg
gacagggacttcctggagaagaggaaaaaagacctcaatgcttaccttcagttgctgcta
aacccagagatggtgaaggcctgtccaactttgattccctacgtctatgacttcctagaa
aacaaggcctacagcaaaggcaaaggagagtttgcacgaaagatagacacatttgtgaat
cctttgcggagttccatgagaaacgtgtccaacgcagtgaaatctctgccggacagtctg
gcagagggaatgaataaagtctctgacaacatgggccgcatgtctgaaagacttggtcag
gacatcaaacagaacattttaaaggtgcctccactccttccaaagtccgacatcgaccca
gaacactgtcgagtctccgcccagctggacgacaacgtggatgataacatccccctgcga
gtcatgctgctgctgatggacgaggtgtttgatcttaaagagaaaaaccagtggctgcgc
agaaacatcaagaacctgctgcagcaactcatcagggccacctatggagacactataaac
aggaaaatcgttgatcatgtggactacatgacctctccagaacaggtggcggattatgtg
aaaaagttcagggattcctactggcccaatgggattctagcagagactccaccgcgccgg
gacaagtgcatccgcatgcggacacgtgtagctgccaaaaccagcctgcttggcatcatg
ccagatgagctgaagcacatcatcggagcggacaccacaaggaagggcatcctgcgcgtc
ttcgacatgtttcagcatcaacccatgaaccggcgcctcgtgtacgtgttcctggaaggc
ttcctggagaccatgttccctcagttcaaattccctgagctgtttgtcaagctgcactcc
cgctcgccacgcattcacagatacaaccagaaactcaaatgctcctctctgaagaggtga
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