KEGG   Cyprinodon variegatus (sheepshead minnow): 107085892
Entry
107085892         CDS       T06110                                 
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cvg04990]
    107085892 (nwd1)
Domain-containing proteins not elsewhere classified [BR:cvg04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   107085892 (nwd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd NACHT Beta-prop_TEP1_C NPHP3_N Beta-prop_EML DUF4062 NBCH_WD40 AAA_16 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st AAA_22 Beta-prop_CAF1B_HIR1 Beta-prop_NWD2_C Beta-prop_VPS8 NPHP3 Beta-prop_LRRK2 NB-ARC nSTAND3 Beta-prop_SCAP Beta-prop_IFT140_2nd Viral_helicase1 APAF1_C AAA_26 SRP54 AAA_35 AAA_33 AAA_19 KAP_NTPase RNA_helicase
Other DBs
NCBI-GeneID: 107085892
NCBI-ProteinID: XP_015232013
LinkDB
Position
Unknown
AA seq 1626 aa
MAGEGRQSSGLQDILRGYCDGAQRTKSNMIRVFVSSTFTDMSGERKALLERAYPEVQSFC
RSLGLVFEVVDLNWGIQNILFGDHEDCEISLQEIQSCKRVSAGPAFVGLLGNRYGHRALP
HFIPEKQFEILLSKLYKNPEGVQQLQEWFLKDNNSVPPTYILQPVTARYPHYSDLRPEVE
KLHDNDLLSWRFTESQLLKLLRTAATEAEDAGDITAEQKQLFYSSVTEREFHEGFWRNGR
KSSALLFVREIPRQRIKERPKRLAKLMDLTLDGLLDAEAQELLIGLKSRLYDTSKKVLNL
HCVELSKGRIDPKRKEHAEYLDNICQQFVSQMTTQIGVEVGSVDGGRKRKIWGSTEKEEE
EYDWLVEEVRQHSTMASELSKGVNGRDGLLGKISVTLWESTTANHGLLVIHGAAGMGKTT
LVCKLAQEMQGVLEAKVVLVIRLLAANHPHRPNINHVLHSICLQVCLACGLAPPSLLSVS
SHLELQHFFKTMLEDVSQQGQTLLVILDSLEQLADEHQAHKLHWLPTDIPPNVHLLVSMD
TTSEAFANLRLKLGAAGCLFEVDHLSRDEGEQIIESYLKAFQRTLTRQQKEAVLQNFKAT
GSPLHLKLLLSTAKRWTSFTPPSDLLLGSSIQEVMSSRLLKLEDKHGKKLVGGALGYIVS
ARRGLLEAELRDVMSLDDDIICEVYRYSLPPTPSLIRLPPILWARLKWDLNDQLEERWTD
GVAVIAFRSRLLSEIVKARYLTPERRGRTHRILAEYFLGCWSGKLKPASLPGLTLLLSDR
KVPPQPLWFVAGLANVRKLQELPHHLLHAGLWEELRQEVVGSAEWLYCKSRVCGVSSLIS
DLDQCFRYMDCSETRLVHDALVLMKPSLDVLSGHMDQSLFYSELLARLSSLSSTFKSVIG
QICSQCDDWLQSCLEPVLIPKSSFLQQPGGALQHTLTTQHGGVLCLDISVALQLLVTGSA
DGMVAVWDLSDRQLVHALQGPTVAIVSVKIIESSTHCLSLAADGSLKRWSLKSGQELHCI
QEAGPAGSAPSSVQLQVSELFVYTWTWTQVKVWRPDGSEIQLCNSEDASLILGVLGDSVV
FLSDSNRVKTFDLVTGTQTVVKLTRSLTPVKAAVAPKQGKVFVVSEDGFLHQISRSGSQN
VTKFPPHPSLVSVSEDEKILYAGCERTLSLFNISGVSAESFLDLQHDDVVLSACVSSDCR
HVVSGAADQLIRVWSVTTGLLLDVLCGCNAPVTSLLLYKGFVVSASSAAASVLLWSLKYD
THHQPPAHIPAGSAHSVITKDGDQVFYVHHRSQREVMIWNNRTGSLSERLAVSAEVSCLE
LAQHKRLLLCGLASGTVLIYPLTLPQETLCIPPPESLSPVLCLAVSSQEKHLAVAYKDSV
CLFEITTRDNFPTVEGPLGRAMLSVLQSPLSSMALLPDRRLLYGTDCGKVKLHDFSTTAS
SDLQPHRSRVTCVASSNWGTHALVGSQDATQRLWALKPVVLDHTMEYKGLFFEGVLCASF
SESDQFVFTGSQDRTIKVWDVASGNLLYVQYVYSPVVRMVTFRNGFVALSLEGSVIQEAF
RCPEHIDPAYNPLRNIRAQYRVTSREKHSDGQQSCMSDLQDFNPAQINLNLISMLRTKPS
SSCILL
NT seq 4881 nt   +upstreamnt  +downstreamnt
atggctggagaaggaagacagagctctggtctgcaggacatcctgagaggctactgtgat
ggagctcagaggacaaagagcaacatgatacgagtattcgtcagctccacctttacagat
atgagcggcgagaggaaagctctgctggagagagcttacccagaggtccagtccttctgt
cgcagtctgggactggtctttgaggtggtggatctaaactgggggattcagaacatcctg
tttggagaccatgaagactgtgagatctccctgcaggagatccagagctgtaaaagagtt
tctgctggtccagcctttgtgggcctgctggggaacaggtatggccaccgagcacttccc
catttcatcccagaaaagcagtttgagatccttctttctaagctttacaaaaacccggaa
ggtgttcagcaactgcaagagtggtttctgaaggacaacaactctgttccacccacttac
atcctccaaccagtcactgctcgatatccacactatagtgatctccgacctgaggttgag
aagctgcatgacaacgatcttctgtcctggcgcttcactgaaagtcagctgttgaagctg
ctgcgcactgcagccactgaggctgaggatgctggagacatcacagctgagcaaaaacaa
ctcttctactcatcagtcactgaaagagagttccatgagggcttttggaggaacggccgg
aaatcgtcggctttgctctttgtccgggagatcccccgacagaggataaaggagagaccc
aaacgtctggccaagctcatggacctcactttggacgggctactggatgctgaagctcag
gaactccttatcgggctcaaatcacgtttgtatgacacttctaagaaggtcctcaatctg
cactgtgtagagttaagcaaaggacgcattgatccaaagcgcaaggagcatgctgagtac
ctggataacatctgtcagcagtttgtctcccagatgacaacccaaatcggagtggaagtt
ggctcagtggatggtgggaggaagaggaagatctgggggagcacagagaaagaggaagaa
gaatatgattggctggttgaagaggtgaggcagcattctacaatggcctctgagttgagc
aaaggtgtcaatggcagagatgggcttctgggaaagattagcgtcaccttgtgggagtca
accacagccaatcatggcttgctggtgatccacggtgctgctgggatgggaaaaaccact
ctcgtgtgcaaactggcgcaggagatgcaaggcgtcctggaggccaaggtggtgctggtg
atcagactgctggctgctaatcacccacacagacccaacatcaaccatgttctccacagc
atctgcctacaggtgtgtctagcgtgtggcctggctccaccctctctgctttcagtcagc
tctcacctggagctgcaacatttcttcaagaccatgctggaggacgtctctcagcaggga
cagactctgctcgtcatcttagactctctggagcagcttgcagatgaacatcaggctcac
aaactgcactggctaccaacagatatccctcccaacgttcaccttcttgtctctatggac
accaccagtgaggcgtttgctaaccttcggctgaagcttggtgctgctgggtgtctcttt
gaggtggaccatctgtctcgtgatgaaggggaacagattatagagtcctatctgaaagcg
tttcagcggacgttgacccgccagcagaaagaagctgtgctgcagaacttcaaggccact
ggctctcctctccaccttaaactcctcctttccaccgccaaacgctggacttccttcaca
ccaccatcagatctgttgctgggcagcagcatacaggaagtgatgtcaagccgcctccta
aaactggaggacaaacatggaaagaaactggtgggcggggccttgggatacattgtatca
gccaggagaggcctgttggaggcagaactgcgtgatgtcatgtccctggatgatgatatc
atctgtgaggtatacaggtattccctccctccgaccccttcgttgatccggctgccccca
atattgtgggcccggctcaagtgggacctcaatgaccagctcgaggagcgttggactgac
ggagttgctgtcattgccttccgtagccggcttctctctgagatagtaaaagcccgctat
ctcacaccagagagacgggggcggactcacaggatcctggcagagtatttcctgggttgc
tggtctggtaaactgaagcctgcgtctctgccgggtctgacactgctgctgtcagacagg
aaggtcccaccccagccattgtggttcgttgcaggattggctaacgttagaaagctccaa
gagttgcctcatcacttgctgcatgctggtctgtgggaagaactacggcaggaagtagtc
ggcagtgctgagtggctgtactgtaagagccgagtctgtggagtgtccagcttgatcagc
gacctggaccagtgcttcagatacatggactgctctgaaaccagactggtccatgatgct
ctggtcctgatgaagcccagcctagatgtcctgtcgggtcacatggaccagtctctgttt
tactcggagctgctggcccgactctcctcactgtcctccaccttcaagtctgtgattggt
cagatctgcagccagtgcgacgactggctccaatcgtgtctagaaccagttctgatacca
aagagcagcttcttgcagcagccagggggggcgctgcagcacacactgactacacaacac
ggaggcgtgctctgtttggacatcagtgtggcactgcagctgctggtcactggttcagct
gacggcatggtggcggtctgggacctcagtgacagacagctcgttcatgctctgcaggga
cctacagtggccattgtgtctgtgaagatcatagaaagctccacccactgtctctcattg
gctgcagatggctccctgaagaggtggagcttgaagagtggccaagagctccactgcatc
caagaggcgggacctgctgggtccgccccctcttcagtccaactgcaggtgtcagagctg
tttgtttacacctggacctggacgcaggtgaaggtttggaggccggatggatcagagatc
cagctctgcaacagcgaggatgcctcgctgattttgggggttctgggggattctgtggtg
tttctgtcagactcaaatcgggtcaaaacatttgacctggttactggcacccagactgtg
gtaaagctgactcgaagcctgacaccagtgaaggcggcggtggcgcctaaacaggggaag
gtgtttgtggtgtcggaggacggattcctgcatcagatctccaggtcaggaagtcaaaat
gtcaccaagttccctccacatccctctctggtctcagtttctgaggatgagaaaatcctt
tatgcaggctgtgaaaggactctgagtctgttcaacatctcaggtgtctctgcggaaagc
ttcctggacctgcagcacgatgacgtggttttatcagcctgcgtgtcctcagactgcaga
cacgtcgtctctggagctgcagaccagctgatccgagtgtggtcagtgaccactggcctc
ctactggacgtcctgtgcggctgcaacgctccggtcacctccctgctcctctacaaaggg
tttgtggtgtcggcctcgtccgctgcagcttcagttctgctatggagcctgaaatacgac
acccaccaccaaccccccgcccacatcccggcaggctccgcccactcagtcatcaccaag
gatggagatcaggttttctatgtccaccatcggagccagagggaggtgatgatctggaac
aaccgcacaggttctctgtcggagcgtttggctgtctctgcagaggtcagctgtttggag
ctggcccagcacaaacgtttgctcctctgtggtctggccagcggcaccgtcctcatctat
ccgctgacgctcccccaagagaccctctgcatccctcctccagagagcctgtccccggtg
ctctgcctggctgtcagctcacaggagaagcacctggctgtggcctacaaagactcagtg
tgtctttttgaaatcaccactagagataactttcccaccgtggaggggcccctggggagg
gccatgctatcagtcctccaatcgccactgtcctccatggccctgctgcccgaccgcagg
ctgctgtatgggacggactgtgggaaggtgaagctccacgacttcagcaccacggccagc
tccgacctgcagccgcatcgcagcagggtcacctgtgttgcgtccagtaactggggtacc
cacgccttagtgggctcccaggacgccacgcagagactgtgggccctgaagccagttgtt
ctggaccacaccatggagtacaagggtttgttcttcgagggtgtcctctgtgcctccttc
tctgaaagtgaccagtttgtcttcactggatcacaagaccgaaccatcaaagtctgggat
gtggcttcaggtaacctgctctacgttcagtacgtctactcccccgtcgtccgcatggtg
acgttcaggaatggctttgtggcgctgtccctggaggggtccgtcatccaggaggccttc
cgctgtccggaacacatcgatccggcctacaaccctctaaggaacatcagggctcagtac
cgggtcacctcaagagaaaagcacagcgacggtcagcagagctgtatgtctgacctgcag
gacttcaacccggcccagatcaacctgaacctcatcagcatgctcagaaccaagccctcc
tcctcctgcatcctcctgtag

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