Cyprinodon variegatus (sheepshead minnow): 107085909
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Entry
107085909 CDS
T06110
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04310
Wnt signaling pathway
cvg04520
Adherens junction
cvg04916
Melanogenesis
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107085909 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107085909 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
107085909 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107085909 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107085909 (tcf7)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
107085909 (tcf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107085909
NCBI-ProteinID:
XP_015232037
Ensembl:
ENSCVAG00000013560
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMIAFKDEGEQEEKIQENAFTERDLADLKSSLVNESEINQSPNT
AAVRRGQQGEHRVFQDKHREHLEGVSKQQDGGMYKSPAYPGYPFLMLPDPYLPNSSVSPS
SNKVSVVQQSHGMHPLTSLLPYSNDHFSPSPPHLPTDMSQKTGRSTPTNTYAGVHRHQSQ
DLSGYYSLPPGGVGQITPSMSWQSQPVYPALSPCGFRQPYSSGLPSASSYSRFPHSLMLG
PSGVHPTGIPHPAIVPSSGKQEHDQYDRGMYMKPQMEVKREKEPKKPVIKKPLNAFMLYM
KEMRAKVIAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPTWSARD
NYEAGLSGVAGEKSKADWGKKKRRKREKQQDSNTDPGSPKKCRARFGLNQQTDWCGPCRR
KKKCIRYLQGGGCPSPSSSDLSAIDSPPSPSPSRLRLYHQQPAPSPGCSPPPVSPSTRLP
SHTRLHTRFPSEQSAGKQTDFRQPPLDKHLPNTHLELSGRQTHCSTALSAAKVAGLSLKV
LTETH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggggacgacctgggagcgaatgatgagatgatagcg
ttcaaagacgaaggagaacaggaggagaaaatccaggagaacgccttcacagagagagac
ctggccgacctcaagtcctctctggtgaacgagtcggaaataaatcaaagtccgaacacg
gcggcggtcagacggggacagcagggcgagcacagggtcttccaggataaacaccgagag
catctcgaaggagtgtcaaaacaacaagatggaggcatgtacaagtcgccggcgtatcca
gggtatccgttcctgatgctgccagacccttacctccccaacagctcagtttcaccatcc
tcgaacaaagtgtcagtggtccagcagtcccatgggatgcaccccctgacgtccctgctg
ccctacagcaatgaccacttcagccccagtcctccacacctgcccacagacatgagccag
aagacaggtaggagcacaccgaccaacacatatgcaggtgttcacaggcaccagtcccag
gacctctcagggtattactcccttcctccaggtggcgttggccaaatcactccttccatg
agctggcagagccagcccgtctaccctgccttgtccccttgtggattcaggcagccctac
tcctccggtcttcccagcgcatcctcctactccaggttccctcactctttaatgctcggg
ccatcaggcgtgcatcctacagggatcccccacccagccatagtaccctcttcaggcaaa
caggagcatgatcagtacgacagaggcatgtacatgaaaccacaaatggaggtcaagcga
gagaaggagcccaagaaaccggtcatcaagaagcctctgaacgccttcatgctgtacatg
aaggaaatgagggcaaaggttatcgccgagtgcacgttgaaggagagtgccgctatcaat
cagattctgggacgaaggtggcatgctctgacccgggaggagcaggccaagtactatgag
ctggcccgaaaagagagacagctccacatgcagctctacccgacctggtctgctagggac
aactatgaggcgggccttagcggggtcgcaggggaaaagagtaaagctgattggggcaag
aagaagaggagaaaaagggagaagcagcaggactccaatacagacccgggctctcctaag
aaatgccgagctcgcttcggcctcaaccaacaaacggactggtgtggtccttgcaggagg
aaaaagaagtgcattcgctaccttcaaggaggaggctgccccagcccatcttcttcagat
ctaagtgctatagactctcccccctccccttctccctcacgcctccgcctctaccatcag
cagcctgctccctccccaggctgctccccgccgcctgtctcgccgtctactcgcctcccc
tcacacacgcgcttgcacactcgcttcccatcagagcagtctgccggtaagcagacggac
ttccggcagcccccgctggacaaacacctcccgaacacgcacctggaactgtccggcagg
cagacgcactgctctacggcgctgtctgccgccaaagtggcaggactttcccttaaagtg
ctaacagagactcactga
DBGET
integrated database retrieval system
