Cyprinodon variegatus (sheepshead minnow): 107085912
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Entry
107085912 CDS
T06110
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107085912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cvg04091
]
107085912
Lectins [BR:
cvg04091
]
C-Type lectins
Lecticans
107085912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
107085912
NCBI-ProteinID:
XP_015232054
Ensembl:
ENSCVAG00000012628
UniProt:
A0A3Q2E3K9
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
MASLALVVLLILGVPISSGSVVQVNSGVQVLRGGSVSISESVLKIRVDPNSNCKVEVVLN
EPVTQRVGKLTPQMFDCSFLKDEVQYVHNGSPLLDNDTVLLRVYRFTALETQVEMVVLQV
RVVDEGSGVVQQGSTPLVVSGFFGLSNPINSTVLSIRVPEDLVCTIRLMTAETQFPMAGR
LVREEDSVLRRGRQVEDFCPGNQPCLHHVTEVRFLKTSCQDFLSSGLKYQHLSPPSPRTD
YLPIRVELREQGTRKLLESQAFWLPVLINGAVPNQPPKASFMASFILEVDLFILTPFSTA
ALDATDSETPQNQLVFNVMVPPADGYITHLEDHTKPIRSFTWLDLHDMKVAYQPPNSSQS
IRQNLQVEFQAIDGSFMNSPPFLVHLSIRASETNAPRVSWNMGLNLLEGQSRPITWEQLQ
IVDKDNIDAVYLVAVDGPVHGRLSVRGGKAFMFRVRDLKEGVVIYHHSDSDSTRDHIVFR
ISDGRHSIRHKFPINILPKDDSPPFLINNVAVEVQEGGTVQLQEYMLLASDLDSSDDFIL
YQIVSSPRAGQLVRKSSTQETVVPVDSFLQRDLIQGQIYYQHSGDETFEDSFDFTLSDRH
QPPNLSQTYTVVVQVFPMKDQLPVEGPGTVRSLTVRETDVVHISRSQLLFIDRENLDADL
TYTITQSCFSPLQPGLMDAGRLFYTDSTNSMKKDHMVPILSSFSQHAVNHMKVAFMPPVE
DIGPDPLFVQFVFSVSDQHGGTVSGLVFNITVTPVDNLSPEAFTNLLRVEEGGSAFVTEE
HLQVQDRDSPDAKLRVEVQRTARHGQLELQGEVLLKGGELRLADLRGLRLRYIHDDSETS
EDEVGLRVTDGLNSVDVLLQIQVLPMNDEPPQLGGGLRDQLSCVEGGRVQVTVDYLSATD
RDSEDSRLTYMLARSPGRGELQRGGMMTDKFSQQDLLQGHVYYVHSGEEIGPHPVFDTVT
LIISDGEAGVVNSCCHGDAPPPPVPLHGTLPVYDLNVTILPVNNKVPKVSLGESPLMVDE
GSRACLCGGVLGASDPDSPAEDLTFLLETPPLHGFLENVLPMPGSEKSNAGIPIESFSLT
HLTSGLINYVQSEHRGLEPTVDQMSISVSDGLYSSAPVPFYIIINPTNDEPPLLLLTNFT
VKEGGFMELTPSILDASDLDVPPGILTFKVERPPAHGTLIRAPHGEVGAERLQKSLPVPS
FTLQELREGMKILYLHDDTETLEDTVLLQLTDGVHSVEGTVRVTVMPVNDNKPHLIRNAG
LDLDFGERRVISSMVLEAADLDTPPDQVFYFINAAPTFGKLLLKTEPSWAELSAGQNFTQ
EQVEMNQVWYHHRASSAGFRGHDSFRFILSDVDNESPTQSFMISIRTVNRGEIILKTKTV
HLREGQQVVLNTDMLLASDSSGRPEELVFAVSTPPRHGLVHAVQLPGVPLISFTQLDVAA
HRICYTHNNDHHSEADSFSFVVTNGASSRSGTLLFTIEHSDRIPPTLKINAGLHLKDGST
ATISPDLLQLTDPDTATANLTYIITLLPTNGELLLRGAPLPSPPRFLQIDIDQLDLAYRH
NPGNPVELDRFYFLPSDGTNKGYLEFGQLREDPAVFNIQVEPVDRMSPSLSRMETPSTVV
DLGAGRYGIFITSRHLQGSDPDSPLEQLEFSIISPPRFGYLENAATGASISQRFHQLDLD
QRSVLYILPADVDVTADSFQFCLVDRAGNRSPPQMLELFWSRVQLSASCYRTCETSGTLQ
IQIQRSGRSVDPAYVSIQVEEGSAKPGRDFTHSSAALIQFDPGVNMKTWNVFPLDDGLEE
NHETFSITLKSPQNAVLGQRTSATVEIIDPRERRCDPKDLKVETTPLPLPPPLHPKEGGD
EDPVIDIEAELLWENQPHPPRGDVPDRRPYLDYEEVQPQDQAVKEPRTRQTSNSHLLRGQ
TDSRTRDAQKFGSLTPLKMEELQLEGAWWRHHPHGLLPQELDTREAPQTGPPDAPQTDHP
REQLQLPLREVGSSLSSSCPDGWTLYRRRCHMVSPSLASWASADRTCSLLFNSSLSSLHS
RKDLSWMWRFAGKKSFWIGGSGSQDGWIRANIQSAGPLSDSADLSSGCVLVENPRRWIST
NCSAEVQHSFICSSEPVPH
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctggctctagttgtgctcctcatcctcggggttcccatcagctccggctct
gtggtgcaggtgaactcaggcgtgcaggtcctcagaggtggatcggtttccatcagtgag
tcagttctaaaaatccgcgtggatccgaactctaactgtaaggtggaggtggttttgaac
gagccggtgacccagagggtggggaagttgactccacagatgtttgattgcagtttcctg
aaggacgaggtccaatatgtccacaacgggagtcctctgctggataatgacacggtgctg
ctccgagtgtacagattcacagccttagaaacgcaggtggagatggtggtcctccaggtc
cgggtggtggatgagggatccggtgtggtgcagcaaggcagcactccattggtggtttct
gggttctttggtttgtccaaccccatcaacagcactgttctgagcatcagggttccagag
gacctggtctgcaccattaggctgatgaccgcagagacccagtttcccatggcgggtcgg
ctggtccgtgaggaggactcggtgctccgcagaggccgtcaggtggaggacttctgccct
ggaaaccagccgtgtctccaccatgtcactgaggtccggttccttaaaaccagctgccag
gacttcctgagctctggcctgaagtaccagcacctcagtcctccatcccccagaaccgat
tatcttccaatccgggtggagctaagggagcaggggacgaggaagctgctggagtcacaa
gccttttggctgccggttctgatcaatggagctgtaccaaatcagcccccaaaggccagc
tttatggcctccttcatcctggaggtggacctgttcatccttacccccttcagtaccgca
gcactggatgccacagactcggaaacaccgcagaaccagctggtctttaacgtgatggtg
cctccagcggacggatacatcacacacctagaggaccacaccaaacccatccggtccttc
acctggctggacctgcatgacatgaaggtggcctaccagccgccaaacagcagccagagc
atccgccagaacctccaggttgagttccaggcgatagatggatccttcatgaacagccca
cctttcctggtccacctgtccattagggcgtccgaaacaaacgcacccagagtctcgtgg
aacatgggtctgaaccttctggagggtcagtcccgaccaatcacatgggagcagctgcag
atcgtggataaggacaacattgatgccgtttacctggtggctgtggacggaccggtgcac
gggcggctcagtgtcagaggtgggaaagccttcatgtttcgtgtgcgggacctgaaggag
ggtgtggtcatctaccaccactctgacagtgactccacccgtgaccacattgtgttccgc
atcagcgacggccgtcacagcatccgacacaagttccccatcaatatcctgcccaaagac
gactccccacccttcctcatcaacaacgtggcggtggaggtgcaggaaggcgggacggtg
cagctgcaggaatacatgctgctggcctccgacctggactccagcgatgacttcatcctg
taccagatagtgtcctccccccgtgcaggccagctggtgaggaaaagctccacccaggag
acagttgttcctgtggacagtttcctgcagagagacctgatccagggtcagatctactac
cagcactcaggagacgagacatttgaggactcctttgacttcacgctctctgaccgccac
cagccgcccaatctgtcacagacatacacagtggttgtccaggtgtttccgatgaaggac
cagctgccggtggagggtcctggtaccgtccgctctctgaccgtcagggagacggatgtc
gtccacatctccaggtctcagctgctctttatagacagagagaacctggatgctgacctg
acctacacgatcacgcagtcttgtttcagcccgcttcagcccggattgatggatgcagga
cgtctgttctacacagacagcaccaactctatgaagaaggaccacatggtgccgatactg
agctccttctctcagcatgctgtgaaccacatgaaagtggccttcatgcccccagtggag
gacataggtccagacccgctgttcgtccagttcgtgttctccgtcagcgaccaacacggc
ggaaccgtctccggtctggtcttcaacatcactgtgacgcctgtggacaacctatcccct
gaggccttcaccaacctgctgcgggtggaggagggagggagcgccttcgtgacagaggag
cacctccaggttcaggaccgggacagccctgacgcaaagctgcgggtggaggttcagagg
acggcgcgtcacggccagttggagctgcagggcgaagttctgctgaagggaggcgagttg
aggctggctgacctgagaggactgaggctcagatacatccatgacgattctgaaaccagc
gaagacgaagttggtctgagagtgacagacggcctgaactctgtggacgtcctgctgcag
atccaggtcctgccaatgaacgatgagccccctcagctgggcgggggtctgcgggaccag
ctgagctgtgtggagggcgggcgggttcaggtgacggtggactatctgtcagccacagac
cgggacagtgaggactccaggctgacctacatgctggcccgtagtcctggcagaggggag
ctgcagagaggcggaatgatgacagataagttctcccagcaggatctgctgcagggtcac
gtctactacgtccactcaggtgaagagatcgggcctcacccggtgtttgacaccgttacc
ctcatcatctctgatggcgaggctggggtggttaacagctgttgccatggagatgctcca
ccgccaccggttcctctgcacggcacacttcctgtttatgacctgaacgtcaccatcctt
cctgtgaacaacaaagttcctaaagtctctctgggggaatccccattgatggtggatgaa
ggctccagggcctgtctgtgcggaggggttcttggggcctcagacccagacagtccagca
gaggacctgacctttctactggagactcctccccttcatggcttcctggagaacgtgctg
ccgatgcctggctcagagaagagcaatgcgggaataccgatagagtccttcagcctcaca
cacctgacctcaggtctcatcaactatgttcagtcagagcacagaggattggagccgaca
gtggaccagatgtccatcagtgtgagcgacggcctgtacagctccgcccctgtgcccttc
tacatcatcatcaacccaaccaatgacgagccaccgttgctgctgctcactaactttacg
gtgaaagagggcggtttcatggagctgactccatccattctggatgcctctgatctggat
gtccctccaggcatcctgaccttcaaggtggaacgcccaccggctcatggcaccctgatc
cgagctccgcatggggaggtgggagctgaacggctgcagaagagcctccctgtcccctcc
ttcaccctgcaagaactcagagaggggatgaagatcctgtaccttcatgatgacacagaa
accctggaggacaccgtgctgctgcagctgacagatggcgtgcactcggtggaggggaca
gtccgggtcacggtgatgccggtcaatgacaacaagccgcacctgatcaggaatgctggg
ctggacctggactttggggagcgcagagtgatatccagcatggtcctggaagctgcagat
ctagacacgcctccagaccaggtgttctacttcatcaatgccgcaccaacatttggaaaa
ctcctgctgaagacagagcccagctgggctgagctttcagctggtcagaacttcacccag
gagcaggtagagatgaaccaggtctggtaccatcacagagccagcagcgccgggttcaga
ggtcatgacagcttccggttcatcctgagcgacgtggacaacgagtctccgactcagagc
ttcatgatctccatccgtacagtgaacagaggtgagatcatcctgaagaccaaaaccgtc
cacctgagggaggggcagcaggtggtccttaacactgacatgttgctggcatcggactcc
tcgggtcgacctgaagagctggtcttcgctgtgtctaccccgccccgacacggcctcgtc
cacgccgtccagcttcccggtgtccctctcatcagcttcactcagctggatgtggcggcg
caccggatctgctacactcacaacaacgaccaccactcagaggccgactccttcagcttt
gtcgtcacaaatggggcctcatcccgcagcggcacgctcctcttcactattgaacacagc
gaccgcatcccaccaactttaaagatcaacgcaggtctccatctgaaggacggctccacc
gccaccattagccctgacctactgcagctcaccgacccagacaccgccaccgccaatctg
acctacatcattaccctgctgcccaccaatggagagctgctgctgaggggagccccactg
ccttccccacccaggttcctccagatcgacatcgatcaactggacctggcttaccggcac
aacccgggcaacccagtagagctagaccgcttctacttcctaccaagtgatggaaccaac
aaaggttacctggagtttggccagttaagagaggatcctgcagtatttaacatccaggtg
gaaccggtggacagaatgtccccaagtttaagccgcatggagactcccagtaccgttgtg
gatcttggcgctggccgttacggtatcttcatcaccagcagacacctgcagggatcggac
ccggacagcccactagaacagctggagttctccatcatcagtccgccccgatttgggtac
ctggagaacgcagccacaggagcctccatcagtcagcggttccaccaactggatctggat
cagcgctctgttctctacatccttccagctgatgtggacgttactgctgacagtttccag
ttctgtctcgtggaccgggcaggaaaccggtctccacctcagatgcttgagctgttctgg
tcccgggtccagttatcggcgagctgctatagaacctgtgagacttcaggaactctgcaa
atccagatccagcgcagcggcaggagtgtagacccagcttatgtctccatccaggtggag
gaaggttctgccaaacccggcagagatttcacccacagctcagccgctctgatccagttt
gacccaggtgtgaacatgaagacctggaacgttttcccgctggatgacggtctggaggag
aaccacgagaccttcagcatcactctgaaaagccctcagaacgccgtgctgggtcagagg
acttcagctactgtggagatcatcgaccccagagaaagacgctgtgatccgaaggacctg
aaggtagagaccactcctcttcctcttcctcctcctcttcatcctaaggaaggtggggat
gaagacccagtcattgacattgaggcggagcttctttgggagaatcagcctcaccctccc
agaggagacgtcccggaccgccggccttacctggactatgaagaggttcagccgcaggac
caggcggtaaaagagcccagaaccaggcagacctccaacagccacctgctgagaggacag
accgacagcaggaccagagatgcacagaagtttggaagtctgactcctcttaagatggaa
gagctgcagctggagggagcatggtggagacatcatccacacggtctcctcccacaggag
ctggacaccagagaagctcctcagactggtcccccagatgctcctcagacggatcatcca
agagagcagctgcagctcccactgagagaggtggggagctccctcagcagctcgtgtcct
gacggatggaccttatacaggagacgctgtcacatggtcagcccgtccctggctagttgg
gccagtgcggacagaacctgctccctgctcttcaacagcagcctgagcagcctgcactcc
aggaaggacctcagctggatgtggaggtttgctgggaagaagtccttctggatcggtggg
tctgggagtcaggacggctggattagggccaacattcagtcagctggcccacttagtgac
agtgctgacctcagctcaggctgtgtgctggttgaaaaccccaggagatggatttctacc
aactgctcagctgaagttcagcactccttcatctgttcctcagagcccgttcctcactga
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integrated database retrieval system
