Cyprinodon variegatus (sheepshead minnow): 107086054
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Entry
107086054 CDS
T06110
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107086054 (fbxo18)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107086054 (fbxo18)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107086054 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
F-box
F-box-like
AAA_30
Viral_helicase1
PhoH
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
107086054
NCBI-ProteinID:
XP_015232274
Ensembl:
ENSCVAG00000006828
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MEVSVKGRAKRKRLNAQECEELGRSEDGADPLTRPQTSHGSRDPNRGLYPRTPRKQRRKA
ASVIGSPSGRQKAINDFYSVEKVLSSSPNKPCAPSTSKPPPGSWVIPEEEEEEDDDVSLL
ATPIEAKPVAEEADEIDDDSLLAAESLPEAEEIPPANAQLGDTATTDYLEGMTAEMFGDD
EEFEEEEVEPLPDAHFGLIGSGKVLLQPQGCIDDLPEEVLREVLCLVPASDLYRSVSLVC
HCWRNIVLDPKFVPFKKQYYRYMMNEKETVQEICSTLKNSNISSPAPSEHSIRSLVVLMA
QHKVGERVVPEDVLACVKKHRLFPQAEASVRLRIPDIKRFLNLGSEGLNPYAAMAVILVL
SENVGDVQTLVSLLSHCMSRKAITEYLSHMATMLLAMERNKIKINFRLHYNIYYVLHLME
NGPFSVSSGQSGIPQIQLTREQQEILSHDIQSHHVVKIVAFAGTGKTTTLVKYAEQRPHL
RFLYVAFNHSVASEARRRFPPNVDCKTAHSLAYNDVGRRYALNKKLTFNVNAFSINFALT
PGAAGFSRAKVVATILNSFMASAHPAIGPQHVPYDYAVNKGYRQVIGPDEQRFFIEEAKA
IWNKMKDLKEKSKQAYYMPHDGYLKLWQLRNPKPCLSDRYDVIFIDEAQDCTPAIMDVLL
SQRCGKILVGDPHQQIYTFKGAVNSLRSASHSHIYYLTQSFRFGSEIAFVGAAILKVCKG
VQKILVGGMQKSGVCDETADKALEAMKNGVSCSRGKIAILARCNLGVFKGAVQLSDANQQ
CRIHFIGGVKNIGLEKIMDIYHLMKEAGQEAKKKAIKDPLIRSFTSSKKKEPYLAFKDYV
TQTEDKELDGKLTIVEQYRDRVPALVARLKACYESDLKGAGTH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctgttaaagggagggccaaaaggaaacgtctaaacgcacaagaatgtgag
gagctgggtcgaagtgaggatggagccgatcccctcactagaccccagacgtcgcatggc
agcagagatcccaacagggggctttaccccagaacccccagaaagcaacgaaggaaagcg
gcatccgttataggaagtccgtctgggcgacagaaggccattaacgacttttactctgta
gaaaaagttctaagttccagtccgaacaaaccctgtgcgccgtctacatcgaaacccccc
cctggctcttgggtcatacctgaagaagaagaagaggaagacgatgacgtcagcctgttg
gctactccgattgaagctaaacctgtagcagaggaagcagatgagatcgatgacgatagt
ctgctggctgctgaaagtctcccagaggctgaggagatcccccccgctaatgcccagctg
ggagacaccgcaacgacggattatctggaggggatgacggcagagatgtttggagatgac
gaggagtttgaagaggaggaggtggagcctcttcctgatgcccactttggactgattggc
agcggaaaggtgttgctccaaccacagggctgcatagatgaccttccagaggaggtgctg
agggaggtgctctgtttggtccctgcttcagacctctatcgcagcgtcagcctggtgtgc
cattgctggaggaacatcgttctggaccctaagtttgtgccttttaagaagcagtactat
cgctacatgatgaatgaaaaggagacggtgcaggagatctgctccacgctgaaaaacagc
aacatcagcagccccgcgccctcagagcacagcatccgcagcctggtggtgttaatggct
cagcataaagtcggagagcgcgtggtgccggaagacgtcctggcctgcgtaaagaaacat
cgtcttttcccgcaggccgaagcctccgtcaggttacgcattcctgacatcaagaggttt
cttaacctcggcagcgagggtctgaacccgtacgccgccatggccgtcatattggtcctg
agtgagaacgtgggtgacgtgcagaccctggtctctctgctctcacactgcatgtcacga
aaggccatcacagagtacctcagccacatggccaccatgctgctcgcgatggaaaggaac
aaaatcaagattaacttcaggttgcattacaacatctactacgttcttcatttgatggaa
aacggtcctttttccgtcagttctggccagagcggaatccctcagattcagctcacacga
gagcagcaggagatcctcagccatgacatccagagccatcatgtggtcaagatagtggcg
ttcgcaggtacaggaaagacgaccacgttggtgaaatacgccgagcagcgtccgcacctt
cgctttctctatgtagcttttaaccactcggtggcctctgaggcgcgacgccgcttccct
cccaacgtggactgcaagacggcccattccttagcctacaatgatgtcgggaggaggtat
gcgcttaacaaaaagctcaccttcaacgtgaatgcgttctccatcaattttgctctgact
cctggggccgcaggcttcagcagagctaaagtggtggctacaattctgaattccttcatg
gcctcggcacacccggccatcggcccacagcacgtcccctatgactacgccgtcaacaag
ggctacaggcaggtcatagggcctgatgagcaaaggttttttattgaagaggcaaaggcg
atctggaacaaaatgaaggaccttaaggagaaatcaaaacaggcctactacatgcctcat
gatggttacctgaagttatggcagctcagaaacccaaagccctgcctgtctgaccgatac
gatgtcattttcatcgatgaggctcaggactgcacaccagccatcatggacgtcctgctt
tcccagcgctgtgggaagatcctggttggagacccccaccagcagatctacaccttcaaa
ggggcggtcaactccctccgctcagctagccactcacacatctattacctcactcagagc
tttcggttcgggtcggagatcgcctttgtgggtgcagccatcctcaaagtttgcaaaggg
gtccagaagatcctggtgggaggaatgcagaaaagtggcgtgtgcgatgagacggcagat
aaagccttggaggccatgaagaacggggtgagctgcagccgagggaagatcgccatcttg
gcgaggtgtaatctgggcgtctttaaaggggcggtccaactatcggatgccaaccagcag
tgccggatccacttcattggaggtgtcaaaaacatcgggctggagaaaataatggacatc
taccacctgatgaaggaggcaggacaggaagccaaaaaaaaagccatcaaggaccccctc
atcaggtcctttacctccagtaagaaaaaagaaccctacttggcctttaaggactacgtc
acacaaaccgaggacaaggagctggacgggaaactgaccattgtggagcaatacagggac
cgcgtccctgcgctggtggcccggctaaaggcgtgctatgagagcgacctaaagggtgca
ggtacgcattga
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