Cyprinodon variegatus (sheepshead minnow): 107086067
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Entry
107086067 CDS
T06110
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107086067
Pattern recognition receptors [BR:
cvg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107086067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
107086067
NCBI-ProteinID:
XP_015232294
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MKQEELADRLWCKHLEGVCQHELKSGLKRKFQCIFEGIAKAGSPTLLNQIYTELYITEGE
TGEVNDEHEVRQIETASRKPHRAETTIRQEDIFKVQPGRDQPIRTVMTKGVAGIGKTILT
QKFTMDWAENKAHQNIQLIFPFTFRELNVLKSKKFNLIELVHHFFTETREIYSFENLQVL
FIFDGLDESRLNLDFHKKEILTDVTETTSVDVLLTNLIKGILYPSALVWITTRPAAANQI
PPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQARRIISHMKKSRSLHIMCHIPVFCWITA
TVLDDVVETKEGKELPNTLTEMYIHFLVIQTKVKKVKYDGGAETDPHWSPKNRKMIESLG
ELAFDQLQKGNLIFYESDLTECGIDIKAASVYSGVFTQIFREERGLYLDKVFCFVHLSVQ
EFLAALHVHRTFINYGINLMEKKQQIPAIINRFFNKSDENVLHQRVIDQALLSPNGHLDL
FLRFLLGLSRQTNQKLLKGLLTETGSSSKSNRETVKYIKEKISENVSAEKSINLFHCLNE
LNDRSLVREIQQSLSSGRLSADKMSPAQWSALIFILVSSGEGLDMFDLKKYSASEEALLR
MMPVIKASNRALLSGCNLSETSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLQ
SPNCKLETLSLSGCLVSEEGCAFLASALSCNPSHLKQLDLSYNHPGDLGVKVLSAGLKDP
NWRLEDLRMEPAGIQWLKPGLGKYSCQLTIDTNTMSRKLKLSEDNRKVTLLEELQSYPDH
PDRFHVPQLLCKTALTGRCYWEVEWSGGVEISVSYRGIKRKGESRDCRFGWNDQSRSLSC
SDGGYSVWYNNRPTFISSSSSLPSSSPSVTNRVAVYVDCSAGILSFYRVFFDSLIHLHTF
NTTFTEPLHPGFGFSSGSSVFLC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggaggagctggctgaccgtctgtggtgcaaacatcttgaaggggtctgtcaa
catgaacttaaatctggtctgaagaggaagttccagtgtatctttgagggaattgctaaa
gcaggaagcccgactctcctgaaccagatttacactgagctctacatcacagagggagag
actggggaggtcaatgacgagcatgaggtcagacagattgaaacagcatccaggaaaccg
cacagagcagaaacaacaatcagacaagaagacatctttaaagtccaacctggaagagat
caaccaatcagaacagtgatgacaaagggagtggctggcattgggaagacgattttaaca
cagaagttcaccatggattgggctgaaaataaagctcaccagaatatccagctcatattt
ccattcacgttcagagagctaaatgtgctaaaaagtaaaaagttcaacttgattgaactt
gtacatcacttcttcactgaaaccagagaaatctacagctttgaaaacctgcaagttctg
ttcatctttgatggtctggatgagagtcgacttaatctcgacttccacaagaaggagatc
ctgactgatgttacggagaccacatcagtggatgttctgctgacaaacctcattaaaggg
atactctatccttctgctctcgtctggataactacccgacccgcagcagccaatcagatc
ccccctgagtgtgttggcatggtgacagaggtcagaggattcactgacccacagaaggag
gagtactttaggaagaggttcagagatgaggagcaggccagaaggatcatctcccacatg
aagaaatcacgaagccttcacatcatgtgtcacattcctgtcttctgctggattactgct
acagttcttgatgatgttgttgagactaaagagggaaaagagctgcccaacaccctgact
gagatgtacatccacttcctggtgattcaaaccaaagtgaaaaaggtcaagtatgatgga
ggtgctgaaactgacccacactggagtccaaaaaacaggaaaatgattgaatctctgggg
gaacttgcatttgatcagctgcagaaaggaaacctgatcttctatgaatccgacttaact
gagtgtggtatagatataaaagctgcctcagtttactctggagtgttcacacagatcttt
agagaggagagagggctgtacctggacaaggtgttctgctttgtccacttgagtgttcaa
gagtttctggctgctcttcatgttcacaggaccttcatcaactatggcatcaacctaatg
gaaaagaagcaacagatacctgctatcatcaatcgatttttcaacaaatcagatgaaaat
gttctccaccagagagttattgaccaggcccttcttagtccgaatggacatctggacttg
ttcctccgcttcctcctaggactttcacggcagaccaatcagaaactcctaaaaggtctg
ctaacagagacaggaagtagctccaagtcaaatcgggaaactgttaaatacatcaaggag
aagatcagtgagaatgtgtctgcagagaaaagcattaatctgttccactgtctaaatgaa
ctaaatgatcggtctctagtgagggagatccaacagtccttaagttcaggacgtctctct
gcagataaaatgtctcctgctcagtggtcagctctgatctttatcttggtttcatcagga
gaaggtctggatatgtttgacctgaagaaatattctgcttcagaggaagctcttctaagg
atgatgccagtgattaaagcctccaacagagcactactgagtggctgtaacctttcagag
acaagctgtgaagctctgtcctcagttcttagctcccagtcatccagtctcagagagctt
gacctgagtaataacaacctgcaggattcaggagtgaagcttctatctgctgggctgcag
agtccaaactgcaaactggaaactctgagcttgtcaggctgtctggtttcagaggaaggg
tgtgcttttctggcttcagctctgagctgcaacccctcccacctgaaacagctggacttg
agctacaatcatccaggagatttaggagtgaaggtgctgtcggctggactaaaggatcca
aactggagactggaagatctcaggatggagcctgctggaatccaatggttgaaaccaggt
ctgggaaagtattcctgtcagctcacaatcgacacaaacacaatgagcaggaaactcaaa
ctgtctgaagataataggaaggtgacactcttggaggagcttcagtcatatcccgatcat
ccagacagatttcatgttcctcagctgctttgtaaaacggctctgactggtcgctgttac
tgggaggttgagtggagtgggggagtggaaatatcagtgagctacagaggaatcaaaagg
aaaggagagagtagagactgtaggtttggttggaatgatcagtccaggagtctgagctgc
tctgatggtggttactctgtctggtacaataacagaccaacattcatctcctcctcatct
tcattgccctcctcctccccttctgtcaccaatagggtagcagtgtatgtggactgttct
gctggaatcctgtccttctacagagtcttttttgactctctgatccacctccacaccttc
aacaccaccttcactgaacctctgcatcctggatttgggttcagttctggttcctcagtg
tttttgtgctga
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