Cyprinodon variegatus (sheepshead minnow): 107086081
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Entry
107086081 CDS
T06110
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107086081
Cilium and associated proteins [BR:
cvg03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
107086081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
Rapsyn_N
TPR_14
TPR_6
TPR_9
PUB
TPR_19
DUF3856
Motif
Other DBs
NCBI-GeneID:
107086081
NCBI-ProteinID:
XP_015232316
Ensembl:
ENSCVAG00000006399
LinkDB
All DBs
Position
Unknown
AA seq
2533 aa
AA seq
DB search
MEKPRARKEKFSLFGSRSTSRATNPPSSSSRSSSPGIHPATVGKRTDRISASGSVTLSKA
EFLERVRHSNQACQQGEFALAVRLYTEALTADPQNCILYSNRSAAYLRLGQYSKALDDAI
KARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLR
DTLEPTYQQLQKMKLDKSPFVVVSVIGQELLTHGHHGASVVALEAGLKIGTCSLKLRGSV
FSALSSAYWNLGDVEKSMAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSKSNYREALAH
HRNQLVLAMKLKDREAASGALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQ
LGDMGAVYTALGDFTNAVQCHEQHLDIAKSLENRREEARAYSNLGSAYHSQRDFDKAISY
HTKVLELAQELSDKSIEMRAYAGLGHAARCMQDLERARQYHQNQLEIAQELQDRGAQGRA
SSNLGIIHHMKGEYETALKLHKAHLSLAQELGDYAAQGRAYGNMGNAYHALGIYDQAVRY
HRQELQISLEVNDRQSQASTHGNLAVAYQALGAHDRALQHYRHHLTIARELRDTQTEARA
LANLGNFHSWRGEYAQALPYFQQYLALSPGLQDLEGEGKVCHNLAYAHYCLGQYKDAVRY
YEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYSRAEECQRYLLSLAQALDNTQAVFRA
YGNLGDVFVCRGDLPGAVKFYQQQLSLAQKAADQKMEADAYAALGSVHRLLRQLDAALSF
HSQELTLRKDLADPQGECRALGHLAAVHMAQGDYTTTFQCYESQLGLAQGLRDARLEAQV
HGNMGITKMNMAVFEEAIGYFEQQLAMLQQLSGSEAMLDRGRAYGSLADCYDALGDYEEA
IQYYEKYLTVAQSLNHVQDQEKAYRGLGNAHRSMGSLQQALVCFEKRLVVAHELGGEGGG
KAQAYGELGTIHSQLGNYEQALSCLEHQLSIARSAGDKSLEAEASDALGGVYQLMADNET
ALQWHQRALSIAEQTGCVRSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLMA
KTLAYGSLGRTHHALQNYAQAVMYLQEGLRLAEQLGRREDEAKLRYRLGLSLWAGGNLEE
AQHQLYRASALFETIRHETQQNLDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERG
RTRAFADLLVERQRGSKQAASADPYIPVTVEHILETVNGQKALILYYSLAGGFLYSWLIS
PGTGIVKFNEVYLGEGGPDTSEFQDGARSPHGGGSVSLDQYICSAREALGVDSHHSRVCS
SSETESEAGDLLEQQFEELNNNLPTGYLRMVSRNNRFNRSCRSMTSLYSTTVSPVKDGLS
SPLCRPIHAGKPPLRALYDLLIAPMEGGLMHSSGPVGRNRQLVVVLEGELYLIPFALLKG
SSSNEYLYERFNIISVPSLASLQAASKARPRSSGASLSPGGGSVAAVVGAPRLPPSVMDR
WLWGPLPSAQEEALSLGEQLGCRPLTGANATKERVLAALNQAECVHFATHISWKLAAVVL
APSQEHTLGDVPSSRRKENTLIGTSTLGEAVDQEGKTEHLFPRTYSSPERLRGMEERSED
GESVCGMEGACDSAPLHDFLLTAADILDLCLLVKLVVLRLYPESSCRVTADGLVGLTRAF
LAAGVQCVCVSLWPVQIAASKLFMHTFYAALLSGTKASVALTEAMKNLQSSKHFSHPSNW
AGYMLIGSDVKLNSPMSLVGQALAEILQYPEKARDALRVLLHLVEKSLQRIQSGHCNPMY
TSQQSVENKVGGVPGWQALLSAVGFRLEVSGCAAGLPAAVFFPTSDPGDHLQQCSTTLQS
LLGLSPPALQALCKLVTTSEAGEQLIHKAVKSMVGMLHQVLVQLQSGDKDQDFPLAPVQV
SISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRNMHFALQALLALFDSTEL
PKRLSMDSSSSLESLSSSQSASQPHSLPVSLSCFPPQPSFAPPGCSDNLSCDAISVYSLS
SLASSLSFLSRPEPAGSDIISHRSHPQEPEKQVGGPGPHPSHRHAGGLSRGRLTNHRGAL
AGVDDEEYEGFSIISSEPLGRAGRECDTLPLPAGHRTGRGGSGRGCAAGQNLTLSSKGSL
STPTSPLKAPPLMLTDPTNHKISLPKRTVKGKASSSESDQSSTETDSTVKSQEERMGPAG
QLDPHELAKKILEETHNHMQAVETLQKANSRVKAVRGAEGQEDPLARQPSLSTPTTPTFK
PSRGACGFQPSETSAFSRPPSRASLKTCSSPFSVRKHLSTLPISDPRPPLTPPKPPSRSS
SLQKINTSSPSSPSSSLPVREKNSPLLFACSDEHRKLKHSGSSYSCDVSPFRCPANSAPS
PAFSYSSTGSVSSSSSPANAPDPGQPKQDTKVQGMNNLKAFWTGVGQKQEAPALLRGGNK
KMSTVQKDVLGLLNLSPRRASGRKHEENPKLEPKPPLAPSANLPTNTKGGVKLPSGNGYK
FLSPGQFFPSSKC
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcccagagccaggaaagaaaagttctctctttttggctctcgctccacaagc
agagctaccaaccctccctcctcatcctctcgatcttcttctcctgggatccatccagcc
acggtcgggaaaaggacagatcgaatttccgcctctggttcggtcaccctaagcaaagct
gagttccttgaacgtgtgcgtcacagtaaccaggcctgccagcagggggagtttgccctg
gctgttcgtctctacactgaagccctcacagcagacccacaaaactgtatcctgtacagc
aaccgatcagcagcttatctgaggcttggacagtacagcaaggctctggatgatgcaatc
aaagctcgacttattaaccctaaatggcccaaggcttactttcgtcaaggggttgccctc
cagtacctgggtcgtcatgccgacgccctggcagcgttcgcctcaggcctcgcccaagac
ccaaaaagtctccagctgctcgtcggaatggtggaggctgcaatgaaatccccactcaga
gacacgcttgagcccacctaccagcagctgcagaagatgaagctggacaagagtccgttc
gtggttgtgtctgtcatcggccaggagctgctgacacacggtcaccacggggcctcggtt
gtagcgctggaggcggggttgaagattggcacttgctctttaaagcttcgtggatcggtc
ttctctgctctgagctcagcgtattggaaccttggagatgtggagaaaagcatggcttac
atgcagcaggacctggaagttaccaagactctaggtgaccagtcgggcgaatgccgtgct
catgggaaccttggctctgcgttgttctctaaaagcaactacagagaagcgctggctcac
cacaggaaccagctggtactggccatgaagctcaaggacagagaagccgcctcaggagcg
ctcagcagcctgggccatgtttacacagccataggcgactaccccaacgcactggccagc
cacaaacagtgtgtcctgctggcccggcagacccagtgccagctatctgaggcgcgccag
ctgggcgacatgggtgctgtttacacagcgctgggagacttcaccaatgctgtccagtgt
cacgagcaacacctggacatcgcaaagtctctagagaaccggcgagaggaggcccgcgcg
tacagcaacttaggcagtgcctaccattcccagcgagactttgacaaggccatatcttac
catacgaaggtgttagagttggcacaggagctgtcagacaaatcgattgagatgagggca
tacgctggtctgggtcacgctgctcgatgcatgcaggacttggagagggcccgtcagtac
caccaaaaccagttagagattgctcaggagctacaagacagaggggcccagggccgagcc
tcctccaacctgggcatcattcatcacatgaagggggagtatgaaacggcgctgaagctc
cataaagcccacctgtctttagcccaggaactgggggactacgcagctcaggggagggcc
tacggtaacatgggcaacgcctaccatgctctgggcatctacgaccaggcagtgcggtac
caccgacaggaactgcagatctctctggaggtgaacgatcgtcagtcacaggcatctact
cacggtaatctggctgtggcttatcaggcgttgggggctcatgaccgagctctccagcac
taccgtcaccacctgaccattgcacgggaactcagagacactcaaactgaagcaagggct
ctagcaaacctcggtaacttccatagttggaggggagagtatgctcaggcgctgccatac
ttccagcagtatctggctttgtctcctgggctgcaggacctggaaggggaaggaaaagtc
tgccacaacctggcctacgctcactactgtctgggacagtacaaagacgctgtcaggtat
tacgagcaggacctggccttggctaaagacctccaggacaaattagcacaagcaaaagcc
tactgcaacctcggccttgcgcacaaagctctaggagagtacagcagagcggaagagtgt
cagagatacctgctctctctagcacaagctctggataacacacaggcggttttcagagcc
tacgggaacctcggggatgtgtttgtgtgtcggggggatctcccaggagctgtgaagttc
taccagcagcagctaagtttggctcagaaagctgccgatcaaaagatggaggctgatgcg
tacgcagcactgggatcagttcacaggcttcttcgccagctggacgccgccttgtccttc
cacagccaggagctgactctccgtaaggacctggccgacccccagggggagtgccgggcc
ctgggccacctggcagcagtccatatggcacagggggactacaccacaaccttccagtgc
tacgaaagccagctggggctggcgcaggggctcagagacgcccgtctggaggcccaggtc
cacggaaacatgggcatcaccaagatgaacatggcggtgtttgaggaagctatcggctac
tttgagcagcagctggccatgctgcagcagctaagtggaagcgaggctatgctggacaga
gggagggcctacgggagcctggcggactgctacgacgctctgggagactacgaggaggcc
atccagtactacgagaaatacctgacggtggctcagagtcttaaccatgtccaggatcag
gagaaagcctacagaggacttggaaatgcacacaggtccatgggcagtctgcagcaggca
ctggtgtgctttgagaagcggttggtggtagctcatgagctcggcggtgaaggagggggt
aaagctcaggcttatggggagctgggcaccatacacagccagctgggtaactatgagcag
gctctctcctgtctggagcatcagctgagcatcgctcgctcagcaggggataaatccctg
gaggcagaggcaagcgatgccctgggaggcgtttatcagctgatggcagacaacgaaact
gctctgcagtggcaccagagggcgctgagcatcgctgagcagacgggctgcgtgaggagc
cagggccgagcctatggaaacctgggtctgacctacgaggctctgggaaactacgagcgg
gccgtggtgtttcaggaacagcatctcagcgtggcggcgcagaccaacgatctgatggcc
aaaactctggcctacggaagcctggggaggacacatcatgccctgcagaactacgcccag
gctgtgatgtacctgcaggaaggtctgcggctggctgagcagttgggtcggagggaagat
gaagcaaagcttcgttatcgcctcggtctgtctctgtgggccggtggtaacttggaggaa
gcccaacaccagctctacagagcgtctgcactgttcgagacaatccgtcatgagactcaa
caaaatctggattacaagctctccctgtttgatctgcaaaccagctcataccaggctctc
cagagagtccttgtcagcctagggcggcatgacgaggccctggccatagcagagcgaggg
cggacgcgtgcgtttgctgatctcctggtggagcgccagagaggaagcaagcaagcagcg
agcgctgacccttacatcccggtcactgtggagcacatcctggagacggtcaatggtcaa
aaggcgttgatcctctactactccttggcaggaggctttctgtacagctggctgatttct
ccaggcacaggcatcgtgaagtttaacgaggtgtacctgggtgagggagggccagacact
tctgagttccaggacggtgctaggagtcctcatggaggaggttctgtgtctttggatcag
tacatctgcagcgctagagaggcactgggagtggacagccatcacagcagagtttgctcc
agcagcgagacggagagcgaagccggagatcttttagagcaacagtttgaggagctgaac
aacaacctcccaacgggctacctccgcatggtgtccagaaataaccgcttcaacaggagc
tgtcggagtatgacgagcctttacagtactacagtgtctcctgtgaaggatggcttatcc
tccccgctgtgtcgacccatccatgctggcaaacctcctctacgagccctttatgactta
ctcatcgcacccatggaagggggcctgatgcacagcagtggacccgttggcaggaacaga
cagcttgttgtagttctggagggagaattgtacctgatcccattcgccttgcttaagggc
agctcgtctaatgagtacctgtatgaaaggtttaatatcatttccgtcccttcactggcc
agcctgcaagctgcgagcaaggctcgtcctcgctccagtggggcttctctttctccaggt
ggagggtcggtggctgcagtagttggggcccctcgcctgcctcctagtgtcatggaccgc
tggctgtgggggcccttaccctctgcccaagaggaggctctgtcgctgggggaacagctg
ggctgtcgtcccctgaccggagcgaacgccaccaaggagcgtgttttagcggctctgaat
caggcagagtgtgttcactttgcaactcatatatcctggaagctcgccgcagtggttctc
gcccccagccaagagcacaccttaggggatgtgcccagcagccggcgaaaggagaacacg
ctgattggaacgtcgacgttaggagaagctgtggatcaggaagggaagacagagcatttg
tttcccaggacttacagcagcccagagaggctcagaggaatggaggaaagaagtgaggat
ggggagagtgtctgtggaatggagggggcgtgcgacagtgcaccgcttcacgacttcctc
ctcactgctgccgatatcctggacctgtgcctcttagtcaaactggtggttctgaggttg
tacccggagtccagctgccgagtcacggctgatggattagtgggtctgacccgtgccttc
ttggctgcaggcgttcagtgtgtgtgcgtctctctgtggccggtgcagatcgccgcctcc
aaactcttcatgcacactttctacgctgccctcctgagtggaaccaaagccagcgtggct
ctgacagaggccatgaagaacctgcagagcagcaagcacttctcacacccctccaactgg
gctggctacatgctgataggcagcgatgtgaagctgaacagtcccatgtcgctggtcgga
caggccttggcagagatcctgcagtacccagagaaagccagggatgccctcagggtgctg
ctgcacttggtggaaaagtccctgcagcgcattcagagcggccactgtaacccgatgtac
acatcacagcaaagcgtggagaacaaggtcgggggagttcccgggtggcaggccctcctg
tccgcggtgggtttccggctggaagtctccggctgcgctgccggcctccctgccgctgtg
tttttcccaacgtctgaccctggagatcatctgcagcagtgcagcaccacgctgcagtct
ctgctcggtctgagccctccggctctgcaggccctctgtaaactggtgacaacgtctgaa
gcaggagaacagctcattcacaaggcagttaaaagcatggtggggatgcttcatcaggtg
ctggtgcagctgcagtcaggcgacaaagaccaagacttcccgctggctcccgttcaggta
tcgataagcgtccagctctggaggctcccgggttgccatgagttcctggctgcactcggc
tttgatctgtgtgaggtcggtcaggaggaagtcgtgttaaagactggaaaacaagccagc
aggcggaacatgcattttgcacttcaggctcttcttgccttgtttgattccacagagctt
cccaagcggctgagcatggacagctcctcgtccctggagtctctttcctcctcgcagtcg
gcctcccagcctcactctctgcccgtctctctcagctgcttcccacctcagccctccttc
gcacccccaggctgctcagacaacctctcctgtgacgccatctccgtctacagcctcagc
tccctcgcctcctctctcagcttcctttcccgccctgagccggcgggaagcgacatcatc
agccatcgctcacatccacaggagccagagaagcaggtgggaggaccgggcccacacccc
tctcaccgccacgcaggcggcctgtccaggggccggctgaccaatcacagaggagcgctg
gcgggagtcgatgacgaggagtacgagggcttctccattataagcagcgagccgctggga
cgcgcagggagggaatgcgacacgctgccgctccccgcgggacatcgaactggcagaggg
ggttctgggagaggatgcgcggcgggccagaatctgacgctgtcctccaaggggagcctc
agcacgccgacctccccgcttaaagctcctccgctgatgctgacggatcctacaaaccat
aaaatctctctgcctaagcgaacggttaaagggaaagccagcagctcagagtcggaccag
tccagcactgaaacagacagcaccgttaagtcccaggaagagaggatgggacccgccgga
cagctggatccccacgaactggccaaaaagatcctggaggaaacccacaaccacatgcaa
gccgtggagacgctgcagaaagcaaacagccgtgtgaaagcagtgagaggagccgagggc
caggaggatcctctcgccaggcagccgtctctgtccacgcccaccactccaacatttaag
ccctccaggggagcgtgtggcttccagccgtcagagaccagcgcttttagcagacctccc
agcagagccagcctgaaaacctgctcctctcctttctccgtccgcaagcatctttctacc
ctccccatctctgatccaaggcctcctctgactcctcctaaaccaccgtcccgttcgtca
tcgctgcagaagatcaacacgtcctctccttcttctccttcctcgtctctccctgtgagg
gagaagaactctccgctccttttcgcctgctcagacgagcatcgcaaactgaaacactca
ggctcatcctacagctgcgacgtatcgccttttcgctgtcccgccaacagcgccccatct
ccagccttctcctattcctccacaggctccgtctcctcctcctccagcccggcgaacgcc
cctgatcccggccagccaaagcaggacaccaaggtccagggaatgaacaacctgaaggcc
ttctggaccggcgtgggccagaaacaggaggcgccggctttactcagaggtgggaataaa
aaaatgagcacagttcagaaagatgttctgggtttgctgaatctctcgcccagacgcgcg
tccggcaggaaacatgaggaaaaccccaaactagagcccaaacctcctctggctccatcg
gcgaatcttccaacaaacactaaaggaggcgtcaagcttccctctgggaacggatacaag
tttctctcacctggacagttttttccatcttcgaaatgttaa
DBGET
integrated database retrieval system
