Cyprinodon variegatus (sheepshead minnow): 107086194
Help
Entry
107086194 CDS
T06110
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00100
Steroid biosynthesis
cvg01100
Metabolic pathways
Module
cvg_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107086194 (lss)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
107086194 (lss)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
107086194
NCBI-ProteinID:
XP_015232464
Ensembl:
ENSCVAG00000022724
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MTEGTQLRRRGGPYKTDPATDLSRWRLRNVEGRQTWAYVEDHETPDREQTMLEAHSLGLD
ISMFVSDSPASESAVEAAFKGMNFYRRLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
PEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSLRILGVGPDDPDLVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWDGLNTLLPEMWLFPNWMPAHPSTLWCHCRQVYLP
MSYCYAVRLSADEDPLILSLRQELYVQNYETIYWPAQRNNVAACDLYTPHSTLLTVAYMV
LNMYEANHSSTLRKKAIRELFDHIQADDRFTKCISIGPISKTINMLVRWYVDGPKSEVFK
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDDPELMECLQEAHEFLR
ITQIPENPPEYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSLRQPIA
SERLYDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAAMQ
ALRHFQKVYPDHRTEEISSTLREGLDYCRRVQRTDGSWEGSWGVCFTYGTWFGLEAFACM
GHTYKSKDVQVEVQKACRFLLEHQMSDGGWGEDFESCEQRRYIQSSSAQIHNTCWALLGL
MAVRHPDQQAIERGVKLLIDKQLLNGDWPQENISGVFNKSCAISYTSYRNVFPIWTLGRF
SRLYPSSPLAGKLKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggaacgcagctgaggaggagaggtggaccttataaaacggatccggccaca
gacctgagccgctggaggctgaggaacgtggagggccggcagacctgggcctacgtggaa
gatcatgagaccccagacagagagcagaccatgctggaagctcattctctgggcctggac
atcagcatgtttgtgtcagactcccctgcctctgaaagtgctgtagaagctgcttttaaa
ggaatgaacttctacagacgtctccaggctgaggacggccactgggccggagactacggc
gggcccctcttcctgctcccaggtctccttattacctgtcatgttgcaaagatccctctg
ccagaagcctggaagaaggagatggtgaggtacctacgctccgttcagctgccagacgga
ggttggggtctacatattgaggataagtccaccgtgtttggaacggctctgagctacacg
tctctcaggatcctgggggtgggtcctgatgatcccgatctggttcgagctcgtaacaac
ctgcacagtaaaggtggcgccgtcgggatcccatcgtggggtaaattctggttggctatt
ttaaacgtctacagctgggatgggctgaacacgttgctgccagagatgtggctgttccct
aactggatgccagcccacccatcaaccctgtggtgtcactgtcgccaggtctacctgcct
atgagctactgttatgctgtcagactgtcagcggacgaagaccccctcattctcagttta
cgacaggagctgtatgtgcagaactatgagaccatttactggcccgctcagaggaacaac
gtggctgcatgtgacctatacacgcctcacagcactctgctcaccgtcgcatacatggtg
ttgaacatgtatgaagccaaccacagcagcacgctgagaaagaaggccatcagagagctg
tttgaccacatccaggctgacgaccgcttcaccaaatgcatcagcatcggaccgatctcc
aagacaatcaatatgctggttcgctggtatgtggacggtcccaaatcggaggtttttaag
gagcacgtctccaggatcccagactacctgtggctgggactggatggaatgaaaatgcag
ggaaccaatggctctcagctctgggacacgtgtttcgctgtccaggcttttcttgaggct
ggagcccaggatgaccctgaactgatggaatgtcttcaagaagcccatgagttcctcaga
atcactcagattcccgagaatccccctgaatataagaaatactacagacagatgaacaag
ggcggctttcccttcagcacccgtgactgtggctggatcgtggccgactgcacggctgaa
ggcctgaagtcggtgatgctgctgcaggagctctgtccctccctcagacagccaatcgcc
tcagaacgtttatacgatgccgtcaatgtgctgctgagcatgaggaacagtgacggtgga
tttgctacgtatgaaactaaaagaggaggaaaactcctggagctacttaacccctctgag
gtgtttggtgacatcatgatagactacacatatgtggagtgcacctctgcagcaatgcag
gctttgaggcacttccagaaggtctatcctgatcaccgcactgaagagataagttccact
ctaagggaaggtcttgattactgcaggagggttcagaggaccgatggatcatgggaagga
tcttggggagtttgcttcacatacgggacgtggtttggtctggaagcctttgcttgcatg
ggtcacacctataagagcaaagatgtgcaggttgaggtgcagaaagcttgtcggttcctg
ctggagcaccagatgtctgatggaggctggggggaggactttgagtcgtgtgagcagcgg
cgctacatccagagcagctcggctcagatccacaacacctgctgggctttgttaggcctc
atggcggtcagacatcctgaccaacaggccattgagagaggagttaagctgttgattgat
aagcagcttctaaatggagactggcctcaggagaacatttctggtgtgtttaacaagagc
tgtgccatcagttacacctcctacagaaacgtcttcccaatctggaccctcggacgcttc
tcaaggctttatcccagcagtccattggctgggaagctgaagctgtga
DBGET
integrated database retrieval system
