Cyprinodon variegatus (sheepshead minnow): 107086239
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Entry
107086239 CDS
T06110
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04141
Protein processing in endoplasmic reticulum
cvg04210
Apoptosis
cvg04217
Necroptosis
cvg04218
Cellular senescence
cvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107086239
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107086239
04217 Necroptosis
107086239
04218 Cellular senescence
107086239
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107086239
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107086239
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
107086239
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C2: calpain family
107086239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
107086239
NCBI-ProteinID:
XP_015232541
Ensembl:
ENSCVAG00000020953
UniProt:
A0A3Q2DFN2
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MLAPGVCMNIINERRTKDGYGTFSNPEKFLNQDYQVLKEYCLIQRKRYTDDMFPADRWSI
SRETQPPSYLDHVKWLRPREIVSNPSFVVDGISRFDFGQGWADNCWFLSAVGALTFQDSI
LKQVVPLEQSFDEDYCGLFHFRFWRFGKWVDVVIDDKLPTIQGKLIFVHSNTPTEFWPAL
LEKAYAKVCGSYSDMNAGSPSEALVDFTGGVHICLDLAKRPPNLWELMSQASLAKSLIGC
GTLPGTSTNSPLENGLVQGHAYTVTGVKQVLSRGKAVRLVRLWNPWGHGEWNGDWSDQSS
LWQTVSHHDRETMLSVCEDGEFWMSLKDFCESYADIDICCLCPSFLDGSSPIHWKTSRHE
GRWVAGVTAGGCMNYPESFWTNPQYRVKIGECREQGENIMLVSLMQKQDKRHRRQDQNIN
IGFNVFEVPQEHQGKRGKFPACFFSRAKCVNQTETYKDAREVMKLMTLEPGEYLIVPATF
DPNMTVSFILTILSKSEINVYENSDACNLNQMEPEKTTSQDNVADEDNKRTLFRQISGQY
VEVDAEQLKHLLNERILKGDLKSGGFSTDACRSMVALMDTSVTGKLDDKEFIGLWRKIVA
YKDIFYHSDVSRTGTLSLSELRKAIMAIGKRSSDNMLNLMALRYGDSSGYISLENFIGLA
LRFERMSQMFSNLSNGTAVTLQEPEWMYLVMYS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgttggccccaggtgtgtgcatgaacatcatcaatgagcgtcgcaccaaagacggctat
gggactttctctaaccctgagaagttcctcaaccaggactatcaggtgctcaaagagtac
tgcctgatccaacggaagaggtataccgatgacatgtttcccgcagaccgctggtccatc
agcagggagacgcagccgccttcatatctggaccatgtgaagtggctcagaccacgggaa
attgtttccaatccttccttcgttgtcgatggaatctcaaggtttgactttggtcaagga
tgggctgacaactgctggtttctttctgctgtcggagctctaaccttccaggattccatc
ctgaaacaagtggttcctcttgagcaatcatttgatgaggattactgcggactgttccac
ttcaggttttggagatttggaaaatgggtcgatgttgtcattgatgacaaacttccgaca
atccaaggcaaattaatttttgtccactctaacactccaactgaattctggcctgctttg
ctggagaaggcatatgctaaggtttgtggctcctattctgacatgaacgctgggtctccg
tctgaggcgttggtggacttcaccggaggggttcacatttgtctggatctggctaaacga
cctccaaacctgtgggagctgatgagccaagccagcctggccaagtcactgattggctgt
gggacactgccgggtacttctaccaactccccgttagaaaacggactggttcaaggccac
gcctacactgtgacgggggtcaagcaggtgctgagtagagggaaggctgtgcgtttggtg
cgtctttggaacccctggggccacggagagtggaatggagactggagtgatcagtcatct
ctgtggcaaaccgtaagtcatcatgacagagaaacgatgctttctgtctgtgaagatgga
gagttttggatgtctcttaaagatttttgtgaatcctacgctgatattgacatctgctgc
ctgtgtccgagcttcctcgatggaagctcccccattcactggaagacctcacgccatgag
ggccgatgggttgcaggagtgactgctggaggctgcatgaattaccctgagtccttctgg
accaatccacagtaccgagtcaagatcggtgaatgcagggagcagggtgaaaacatcatg
ctggtgtctctgatgcagaagcaagacaaaagacacagacgacaggaccaaaacatcaac
attggatttaatgtgtttgaggtgcctcaagaacaccaaggaaagaggggaaaatttcca
gcctgtttcttcagtagagccaaatgtgtgaatcagacggagacttataaggatgcacgt
gaggtgatgaagctgatgacactggagcctggtgaatacttgatcgttccagccaccttt
gacccaaacatgacggtctccttcatcctgaccatcctctccaagtctgaaattaacgtc
tatgaaaactctgatgcctgcaaccttaatcaaatggaaccagagaagaccacttcacag
gacaatgtagcggatgaagataataagagaaccttgttcagacagatatctggccagtat
gtggaagtggatgctgagcagctcaaacatctccttaatgaacgaatcctaaaaggggac
ctaaaatctggaggtttcagcactgatgcctgtcgcagcatggttgctttaatggataca
tctgtcactggcaaactggacgataaggaattcattggtttgtggaggaagatcgtggca
tacaaggacatcttctatcacagtgatgtgtcccggacagggactctgtcactgagtgaa
ctgaggaaagcaatcatggctataggaaaaaggagcagcgacaacatgctgaatttaatg
gctctgcgttacggcgactcctctggatatatatctctggagaacttcattggtttggct
cttcgctttgaacgcatgtctcaaatgttcagcaacttgtccaatggtacagctgtgact
cttcaagaaccagagtggatgtaccttgtgatgtacagctaa
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