Cyprinodon variegatus (sheepshead minnow): 107086272
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Entry
107086272 CDS
T06110
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cvg01100
Metabolic pathways
Module
cvg_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107086272
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107086272
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
107086272
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
107086272
Glycosyltransferases [BR:
cvg01003
]
Glycan extension
O-Glycan
107086272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATP-synt_D
FlxA
Motif
Other DBs
NCBI-GeneID:
107086272
NCBI-ProteinID:
XP_015232586
Ensembl:
ENSCVAG00000020324
UniProt:
A0A3Q2DF96
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MMLWRWLLALMARIGLITLTLCCSLLLVYLLACKPSSKGKHTSLLWSGGATSKEGYMALL
QEREDSHRHYISSLTKQIGELKEALEERTQQLQESLEKAKSKGILPQGLESLHKIPTKSD
LKEFFQSQLNQAEVNSGVELPNEYALIPYDTFTLQMVYQLETGLTKHPAERPVRRDRRNE
LIGTVETALHVLNGPQQRADNIRSKRTYSPSDFIQGLTRTERTTGTVYELMFKGSSPQDF
TQLVLFRPFGPLMKVKSDNLNTQSILINIIVPLSGRVDAFRQFITNFREVCIQEDGRVHL
TVVYFGRDQIDQVKAVLDQTTRETRFRSFTLIQLNEEFSRGRGLDVGARAWRQRQNVLLF
FCDVDIHFTADFLTSCRLNAEAGKKVYYPVLFSQYNPSVIYSNLTLLPSIKQQLVIKKEN
GFWRDFGFGMTCQYRSDFINIGGFDRSIRGWGLEDVHLYRKYLHSKLMVVRAPSRGLFHL
WHDKSCADELPPDKYKMCMQTKAMNEASHGQLGELFFKQDIELHLNSQKQLREI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtggcggtggctgctggccctgatggcccggattggtctcatcacattgaca
ctctgctgctctctgctgctcgtctacctgctggcttgtaaaccttcttccaaaggcaag
cacacttctctgctttggtctggaggagccactagtaaggaaggatacatggccttactg
caggagagagaggactctcatagacactacattagtagtctgacaaagcagataggagag
ctgaaggaggctctggaggagagaactcaacagcttcaggagtccctagagaaggctaaa
agtaaagggattttacctcaaggtctggagagtctgcacaagatcccaacaaagtctgat
ctcaaggagttcttccaatcccagctgaaccaggcagaggtgaactcaggtgtggaactg
cccaacgaatatgcactgatcccttatgacacctttaccctgcagatggtctaccagctg
gaaacggggctgaccaagcacccggctgagaggccagtaaggagagaccgcagaaacgag
ctgataggtacagtggaaacggcactgcacgtcctgaacggaccccagcaacgagctgac
aacatcaggagcaaacgcacctactccccttcagacttcatacagggattgactcgcaca
gagaggaccacagggactgtatatgagctgatgttcaaaggcagtagcccgcaggacttc
acccagctcgttctctttaggccatttgggcctttgatgaaggtgaagagtgacaacctg
aacacacaaagcatcctcatcaacataatagttcctctgtcggggagggtggacgccttc
aggcagttcatcaccaacttcagagaggtttgcatccaagaggacggcagggttcacctc
actgttgtctactttggtcgggaccagatagaccaggtgaaggctgtgttggatcagaca
accagggagactcggttcagaagtttcaccttgatccaactgaacgaggagttttctcgt
ggccgaggcctcgatgtcggcgcccgggcctggagacaacgccagaacgttctgctcttc
ttctgtgatgtcgacatccacttcacggcagatttcttaacttcctgtcgtctgaatgct
gaagctggtaaaaaggtgtactaccctgtgctcttcagccagtacaacccatctgtcatc
tacagcaatctcaccctcctaccttctataaaacaacagctggtgataaaaaaagaaaat
ggattctggcgggactttggatttggcatgacctgccagtacagatcagacttcatcaac
attggtggctttgaccgcagtatcagaggctgggggctggaggacgtccacctgtacagg
aagtacctccatagcaagctgatggtagttcgagctccatcccgagggctctttcacttg
tggcatgacaagagctgtgcagatgagcttcctccagacaagtacaagatgtgcatgcag
accaaagccatgaacgaggcctcgcacggccagctgggagagcttttcttcaaacaggac
atagagctccacctgaactcccagaaacagctcagagagatctaa
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