Cyprinodon variegatus (sheepshead minnow): 107086317
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Entry
107086317 CDS
T06110
Name
(RefSeq) glutamate receptor 1-like
KO
K05197
glutamate receptor 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107086317
04082 Neuroactive ligand signaling
107086317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107086317
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107086317
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
107086317
NCBI-ProteinID:
XP_015232669
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MTLFGTSNINNIEIVEQGKNAKSYHYILANLGFLDIDLTDLRKGGANITGFQLVNNSEPS
VSRIVQQWMEFDNKDSKVPKTGLKYMGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGEC
LANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGRRTNYTVSVMELAPFGPKKESPYV
MLKKNHEQLTGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGE
LVYGKADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGAEPQTPTQAAASNGVQPSQTPTQQNAN
QQSPEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKAADPSV
FVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSP
LRIPVNLAVLKLNEQATLDKLKNKWWYDKGECGSKDAARKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESRRMKVSTARAAAATAAQAFHCSALESGASAPYTELQGYG
LYANNTVKI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacattatttggcacttccaatataaacaacattgagattgtcgaacaaggaaagaac
gcaaagagctatcactacatcctcgccaacctgggtttccttgacatcgacctgacggac
ctgaggaaaggcggcgccaacatcactggctttcagcttgttaacaactcagagccgagt
gtgagccgcatcgtccagcagtggatggagtttgacaacaaagactccaaagtgcccaaa
actggactcaaatacatgggcgcactaacttacgacggggtgaaagtcatgtccacggcc
ttccagaatctaaggagacagaggatagacatctctcgtcgcggcaacgccggagagtgt
ctcgccaacccaccagccccttggggacagggcatagacatccagagagccttgcagcag
gttcgcattgatggattgacgggtcacatccagttcaacgagaagggtcgcaggaccaac
tatactgttagtgtcatggaactggccccatttggacccaagaaggagtctccctacgtg
atgctaaaaaagaaccacgaacagcttacagggaatgataagtatgaaggctacattgta
gagctagctgcagagatagccaagcatgtgggttaccagtacaagctgaagattgtttcc
gatggcaagtatggagcccgagatcctgaaacaaagatgtggaatggcatggttggagaa
ctggtgtatgggaaagcggatctggccgtcgctcctcttactatcacccttgtccgcgag
gaggtgatagacttttcaaagcccttcatgtctttgggcatttccatcatgatcaagaag
cccaccaagtccaagcctggagtgttttcctttctggacccgctagcttacgagatctgg
atgtgcatcgtgttcgcctacatcggcgtcagcgtcgtcctcttcctcgtcagtcgcttc
agcccttacgagtggcacgccgaagactacgaggagggagccgagcctcagactcccaca
caggcggcggcctccaacggggtgcagccgagccagacgccgacgcagcagaacgccaac
cagcagagcccagaacagaccaacgagtttggcattttcaattcgctttggttttcactg
ggcgccttcatgcagcagggttgtgatatctcaccacggtctctttcaggtcgtatcgtt
ggtggcgtctggtggttcttcacccttatcatcatctcgtcctatactgccaacctggct
gctttcctgaccgtggagaggatggtgtctcctatagagagcgctgaggacctggctaag
cagacggagatcgcttatgggacgctagacgccggctccactaaagagttcttcaggagg
tcaaaaatcgccgtgtttgagaagatgtggtcctacatgaaggcagccgatccttccgtg
ttcgtaaaaacgacagacgagggagtgatgagggtcaggaaatccaaaggcaagtacgcc
tacttgctggagtccacgatgaacgagtacatagagcagaggaagccatgtgacacaatg
aaggtgggggggaacctggactctaaaggttacggaattgcaacgcccaaaggctcccct
ctaagaatcccagtaaacctagcggtgttgaaactcaatgagcaagccaccttagacaaa
ctgaaaaacaaatggtggtacgataaaggcgagtgtggcagcaaggacgccgcaagaaag
gacaagacgagtgctcttagcctcagcaacgtggcaggcgtcttctacatcctgattgga
ggcctgggtctagccatgctcgtggcactggtggagttctgctacaaatcgcggaccgag
tcacgccgaatgaaggtgtcgaccgcgcgagccgcggcagccacagccgctcaggccttt
cactgctcagccttagaaagtggtgctagcgccccctacactgagctgcagggctacggc
ctgtacgccaacaacactgttaagatataa
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