Cyprinodon variegatus (sheepshead minnow): 107086332
Help
Entry
107086332 CDS
T06110
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04810
Regulation of actin cytoskeleton
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107086332 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107086332 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107086332 (cyfip2)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107086332 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
107086332 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
zf-CW
Motif
Other DBs
NCBI-GeneID:
107086332
NCBI-ProteinID:
XP_015232685
Ensembl:
ENSCVAG00000019360
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSRWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGGREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVVAIEDFHKHSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDGVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgacgctggaggacgctctgtccaacgtggacctgctggaggagctg
ccgctgccggaccagcagccatgcatcgaaccgcccccctcctccatcatgtaccaggct
aactttgacaccaactttgaggacaggaacgcctttgtgaccggcatcgcccgttacatc
gagcaggccacggtccactccagcatgaatgagatgctggaggaaggacatgaatacgcg
gtgatgctttacacctggagaagctgctccagagccatccctcaggtgaaatgcaacgag
cagcccaacagagtggagatttacgagaagacggtggaggtgttggagcctgaggtgacc
aagctcatgaagttcatgtacttccagcggaaagccatcgagcgcttctgcagcgaggtg
aagcgtctgtgccacgctgagaggaggaaagacttcgtgtcggaggcctacctgctcacc
ctgggcaaatttatcaacatgtttgctgtgctggacgaactgaagaacatgaagtgtagc
gtgaagaacgatcactccgcctacaaacgggcggctcagttcctgaggaagatggccgac
cctcagtccatccaggaatcccagaatctctccatgtttttagccaatcacaacaggatc
actcagtgcctgcaccagcagctggaggtgattccaggctacgaggagctcctggccgac
atcgtcaacatctgcgtggattattacgaaaacaaaatgtacctgacgcccagtgagaaa
cacatgctgcttaaggttatgggttttggtttgtacctcatggacgggaatgtgagtaat
atctacaagctggatgccaaaaaaaggattaacctgagcaagatcgacaagttcttcaaa
cttcaagtggtgcctctgtttggagacatgcagatcgagctgtcgcgctacatagagacg
agcgctcactatgaagaaaacaagtccaggtggacgtgcacccagagcagcatctcgccg
cagtacaacctgtgcgagcagatggtgcagatcagggacgaccacatccgtttcatctcg
gagctggcgcgctacagcaacagcgaggtggtgacgggctccggcctggacagccagaag
tcggacgaggagtacagggagctgttcgacctggctctgagggggctgcagctgctgtcc
aagtggagcacgcacgtcatggaagtgtactcctggaagctggtgcatcccaccgataag
ttctgcaacaaggactgtccgggaacggcggaggaatatgaacgagccacgcgttacaat
tacaccagtgaggagaagtttgccctggttgaggtcattgccatgatcaaagggctgcag
gttctgatgggtcgcatggagtccgtcttcaaccaggccatcaggaacacaatctacgca
gctctgcaggactttgctcaggtgacgctcagagagccgctgcgccaagccgtacgaaag
aagaagaacgtcctcatcagcgtcctgcaggccattcggaagaccgtctgcgactgggag
ggaggaagagagcctcccaacgacccctgtctgaggggagaaaaagacccaaagggtggg
tttgacatcaaggtgcctcgtcgggcagtgggaccctccagcacacagctctacatggta
cgcaccatgctggagtccctgatagccgacaagagtggatctaagaaaactctgaggagc
agtctggatggacccatagtggtggccatagaagattttcacaagcattcattcttcttc
acacacctgcttaacttcagtgaggccttgcagcagtgctgcgacctgtcccagctgtgg
ttcagggagttcttcctggagctcaccatgggccgcagaatccagttccccatcgagatg
tccatgccctggatcctcaccgaccacatcctggagaccaaggagccttccatgatggaa
tatgttctgtatcctctagacttatacaatgacagtggctattacgcactcaccaagttc
aagaagcagttcctgtatgatgagattgaagctgaggtaaacctctgctttgatcagttt
gtgtacaagttggcggatcagatatttgcctactacaaagcgatggccggaagtgtcctc
ctagacaaacgcttcagagcggagtgtaaaaactatggcgtcatcattccgtacccgccg
tcgaaccgttacgagacgcttctgaagcagagacacgtacagcttttgggtcgatcgatc
gatctgaaccgtctgatcacccagaggatctcagccgccatgtataagtctttggaccac
gccatcagccgctttgagagcgaggacctcacgtccatagtggagttggaatggctgctg
gagatcaacaggctgacccaccgcctgctgtccaagcacatgaccctggacagctttgac
gccatgttccgcgaggccaaccacaacgtctcggccccctacggacggatcacgctccac
gtcttctgggagctgaactttgacttcctcccaaactactgctacaacggatccaccaac
cgctttgtacgaaccgctattcctttcacccaggagcctcaaagagacaagccagccaat
gtgcagccttattacctgtatgggtccaagccgctgaacattgcctactcccacatatac
agctcctacagaaactttgtcggccctcctcatttcaagaccatctgccgtctcctcggt
taccaaggcatcgccgtagtgatggaggagctgctcaagattgtcaagagcctgttacag
ggaaccatcctgcagtacgtaaaaactctgatagaagtcatgcccaagatctgccgtctg
ccacgccatgaatatggctccccaggcatcctggagttcttccaccatcagctcaaggac
atcattgaatacgccgagctgaagacggatgtcttccagagtttaagggaggtgggaaac
gccatcctcttctgcctgctcatcgaacaagctctgtcccaggaggaagtgtgtgacctg
cttcatgccgcccccttccagaacattcttcctagagtctacatcaaagagggagagcgg
ctggaggtgaggatgaagaggctggaggccaaatacgccccgctacacctggtgcctctg
atcgagaggctcgggactcctcagcaaatagccatcgcgagggagggggacctgctgacc
aaagagcgtctctgctgcggcctctccatgttcgaggtcatcctgacgcgcatccgcagc
ttcctgcaggacggggtgtggcgtggacctccacccaccaacggcgtgatgcacgtggac
gagtgcatggagttccaccgcctgtggagcgccatgcagttcgtctactgcatccccgtc
ggcacacacgagttcacggcagagcagtgctttggggacggcctaaactgggcggggtgc
gccatcatcgtgctgctcggacagcagcgccgttttgacctcttcgacttttgctaccac
ctgctcaaagtccaaaggcaggacggcaaagacgagatcatcaagaatgtgcccctgaag
aagatggccgaccgcatcagaaagtaccagatcctcaacaatgagatattcgccatcctc
aacaagtacatgaaggcggtggagacggacagttccaccgtggagcacgttcgctgtttt
cagccacctatacaccagtccctcgctaccacgtgttga
DBGET
integrated database retrieval system
