Cyprinodon variegatus (sheepshead minnow): 107086393
Help
Entry
107086393 CDS
T06110
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04371
Apelin signaling pathway
cvg04910
Insulin signaling pathway
cvg04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107086393 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
107086393 (ppargc1a)
04920 Adipocytokine signaling pathway
107086393 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107086393 (ppargc1a)
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
107086393 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
AF-4
Motif
Other DBs
NCBI-GeneID:
107086393
NCBI-ProteinID:
XP_015232781
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MAWDRCNQDSVWTELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNFFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
RSCASSPDASPHTPEPEEPSLTESTWNGKARGGSGQQNRPVRRPCTELLKYLTATDDILL
NTKASDAKSTWGGPSSRDKSSLGLGASSSSSSPSSSSTSSFSSLSSTSSSTSSTTSKKKS
AVSSQQQLQQQQSLQQHHQRGESRAAGQCIVAGHGSGKWKRCSQDDGVKDSEGASYPIGR
RTYTCGHACPKQEHGPPSEEGRPPGNVGRLAAARFIRYMHSYSLPPREVSHSCEHCREAA
GATQARQGFGRQGRSSNGVASSAPHRNITVTIKKRDVKPGHPLLSQLLTSKQRPTQFLAQ
LHQLSVSSASSVRSKTAGKRSRSPSKILFKGQEREVKDVSAFINQTQESDPGPPLSPITL
DIHSWISQPEPGLDWSFGREPGWPKQGGFGEDVDHDNDGDGVVVDDDDDNHVIGSPAAVL
SQGPPLSPLLPDTSIAEPSPPCIIQGQGPPHRQALSEHPDDQGNLLLAKPTTLPLPLTPE
SPNDHKGSPFENKTIERTLSVEIAGTPGLTPPTTPPHKASQENPFKASLKTKLSSCCSSA
LTCKRARLSELGAGASALAPGASAGGPAKKGPEQTELYAQLSKASIALPYTIAQCAVGGE
VEGHFSTGNNKKAAGQDGHSDHDYCHVLAASKKDGGTATVSMATSMEMTFTPGAISTGKE
GNRHTECMDSAMSTSFLPSSGSTPSISICDLTKEQNFVQLDGNTCSVRDIGEHTHPQITQ
MLTQGATVVRDQLPPSATSRKPLCDQEIRAELNKHFGPPLQALFTQGEQERIESSKPNKP
TTPQSPEGGEIDFYSQRLSGSSYLHPGLLSFHDELELDEDRDNRFVFPWEGTHLDFLFDC
PPRSPSCSPPSTCSPSRGSISPTSSLLLSPGRSFCWNGSGSRSRSRSHSGSRSSSSRYRR
RSLSSSPDRRPSSWSHHTSDLNAFRSRIHKSPNPQSRSLLSRRPRYDSYEEYQHERLKRE
EYRLDYEKREFERAEQREKQKQKAVEERRVVYVGRLRSDCSRSELKRRFEVFGEIEECAV
NLRDDGDNFGFIMYRYTCDAFAALENGHTLRRSNEPQFELCFDGQRQLSKSQYTDLDSHS
DDFDPTSTKSKYDSMDFDSLLREAQRSLRR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtgtggacagaattagagtgtgctgccttg
gttggtgaagaccagcccctctgcccagaccttcctgaacttgacctctcagagctggat
gtcagtgacttggatgccgacagctttctgggaggccttaaatggtacagcgaccaatca
gagatcatttcttctcagtatgggaatgaagcatctaattttttcgagaagatagatgaa
gaaaatgaggccaacttactggcagtgcttacagagaccctggacagcatcccggtggac
gaggacgggctcccttcatttgaggccctggcagatggggacgtgaccaatgcaagtgac
cggagctgtgcctcctccccagatgcctcacctcacaccccagagcctgaggagccttct
ttgacggagagcacctggaatggcaaagcaagagggggctctggccaacagaatcgcccg
gtgaggcgaccttgcactgagctactaaaatatttaaccgccactgatgacatcctgctc
aacaccaaagccagtgatgccaagagcacctgggggggtcccagtagcagggacaagagt
agcctgggtcttggtgcctcatcctcgtcctcatcgccatcctcgtcatccacctcctcg
ttctcctccctgtcttccacatcttcgtccacttcgtccaccacctccaagaagaagtca
gctgtgtcatctcaacagcagctacaacagcagcagtcactgcagcagcatcaccagcga
ggtgagagccgggctgcaggccagtgtattgtggctggtcatgggtctgggaagtggaag
cgttgctctcaggatgacggggttaaggattcggaaggtgcctcttaccccattggtcgc
agaacctacacctgcggccatgcctgcccaaaacaggagcacgggccgcccagtgaagaa
ggaaggccgccaggcaatgttggccgtctggctgccgctaggttcattaggtatatgcat
tcttattccctccctccccgagaggtgagtcacagctgtgagcattgccgagaggctgca
ggcgccactcaggctaggcaagggtttggcagacaaggccgtagtagcaatggcgttgcc
agcagtgcgcctcataggaacatcacagtgacgattaagaaaagagatgtgaagccagga
caccctttacttagccagctgcttacctccaaacagaggccgactcaatttctggctcaa
ctccaccaactctcagtatcctctgcaagtagtgttagaagcaaaacggcaggtaagaga
tctaggagcccatccaagattttgttcaagggacaagagagggaagtcaaagatgtctct
gcttttataaaccagactcaggaatcagatccaggacctccattgtcacctattacatta
gacatacacagctggatcagtcagccggaaccagggctagattggagctttggacgagag
cctgggtggccaaagcagggaggctttggggaggatgtggaccatgataatgatggtgat
ggtgttgttgttgatgatgatgatgataaccatgtcataggcagccctgctgcagtgctc
tctcagggcccacccctcagccctctcctcccagatactagcattgcagagccctcccct
ccctgcatcatacaagggcaaggccccccacacaggcaggcactcagcgagcaccccgat
gaccagggaaacctgttgttagccaaaccaaccaccttgccacttcctttgaccccagag
tctccaaatgaccacaaaggatcaccctttgagaacaaaaccattgaacgcacattaagc
gtggagattgccggaaccccaggtttgacaccacctaccacgcctccacacaaagccagt
caagagaatcctttcaaagcatcactgaaaaccaagttgtcctcgtgttgctcctcggcc
ttgacgtgcaaaagagccaggctgagtgagttgggtgccggagcttcggccctggcccca
ggtgcctcagccgggggccccgccaagaagggtcctgaacagactgagctctatgcgcag
ctgagcaaagcatccatcgcccttccttacaccattgctcaatgtgcagtggggggcgaa
gttgagggacacttcagcactgggaacaataagaaggccgctgggcaagatggccacagt
gaccatgactattgccatgtactggctgccagtaagaaggatgggggcacagcaactgtt
tccatggctacatctatggaaatgacattcaccccaggtgccatctccactggcaaggag
gggaacaggcacacagaatgtatggactcagccatgtcaacatcttttctaccatcttca
ggttctacaccatcaatctcaatttgtgatttgactaaagagcagaattttgtccaactg
gatggaaacacttgctctgtaagggacataggggagcatacccatcctcaaatcactcag
atgctcacacagggggccactgttgttagggaccaattgccaccttctgccaccagccgg
aagcccctgtgtgaccaggaaatcagagcagaactcaacaagcactttggccctccccta
caagctctctttactcagggtgagcaggagagaattgaaagcagtaaaccaaacaagcct
acaaccccccaatcccctgaggggggtgaaattgacttttactcccagaggctgtcagga
tccagctacctgcacccagggttactgtcctttcatgatgagctcgagctggacgaggat
cgtgataatcgctttgtctttccatgggagggtacccatctggactttctatttgactgc
cctccccgttctccctcttgttctccaccatccacatgctccccttcacgaggttcaatc
tccccaacatcttcccttctcctgtcacctggccgatcgttctgctggaatggcagtggg
tcccgttcccgctctcggtcccactctggctcccgcagttcctcatcacgatatcgcagg
cgctctctgtccagctcaccagacaggcgcccctcctcttggtctcatcatacctccgat
ctcaatgctttccgctccagaatccataagagccccaaccctcagtctcgatctctgctc
agccgcaggccaagatatgacagttatgaagaataccagcatgagagacttaagagggag
gaataccgcctggattacgagaagcgggagtttgaaagggccgagcagagggagaaacaa
aagcaaaaagcagtggaggaaagacgggtggtgtatgtggggcgactgaggtccgactgc
agccgctcagagctgaagcgccgctttgaagtctttggggaaattgaagaatgtgcagtg
aacctaagggacgatggggacaattttggcttcatcatgtaccgttacacctgtgacgcc
tttgccgcccttgagaatggacacaccctccgtagatcaaatgagcctcagtttgagttg
tgtttcgatggacaaaggcagctcagtaaatcacaatacacagacttggactcccattcg
gatgactttgatccaacttccacgaagagcaaatatgactccatggattttgacagcctg
ctgagagaggcccagcgcagcctgagaaggtaa
DBGET
integrated database retrieval system
