Cyprinodon variegatus (sheepshead minnow): 107086445
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Entry
107086445 CDS
T06110
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03015
mRNA surveillance pathway
cvg04261
Adrenergic signaling in cardiomyocytes
cvg04382
Cornified envelope formation
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107086445
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107086445
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
107086445
09158 Development and regeneration
04382 Cornified envelope formation
107086445
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107086445
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107086445
03036 Chromosome and associated proteins [BR:
cvg03036
]
107086445
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107086445
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107086445
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107086445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WD40_Gbeta
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
107086445
NCBI-ProteinID:
XP_015232878
Ensembl:
ENSCVAG00000013279
UniProt:
A0A3Q2CYR2
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPSTILSSTCHTEADIISTVEFNSTGELLATGDKGGRVVVFQREQES
KTQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDEDGRFRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTFISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMRQAALCDKHCKYFEEPEDPSTRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttacctcccgtacctcttccgccctccgagcaccatcctgtcc
tccacttgccacaccgaagctgacattatctctacggtggagtttaactcaacaggggag
ctgttggccactggggataaaggaggaagagtggttgtcttccagagggagcaggagagt
aaaacacaacctcatcgtcgaggggagtacaacgtttacagcacattccagagtcacgag
cccgagtttgactacctgaagagtttggagatcgaggagaagatcaacaagatcaaatgg
ctccctcagcagaacgcagcgtactttctgctctccaccaacgacaaaaccgtgaagctg
tggaagataagcgaacgggacaagcgtccggaaggctacaacctgaaggatgaggacggg
cgcttcagggacccctccaccatcacctctctgcgggtgcctgttctgcagcccatggat
ttgatggtggaggcgacagccaggcgcgtcttcagcaacgcccacacgtaccacatcaac
tccatctccgtgaactctgacctgcagaccttcatctccacggatgacctccgggtgaac
ctgtggaacctggagatcacggaccgcagcttcaacattgtagacattaagccagccaac
atggaggagctgacggaagtcatcacctcagcagagtttcacccccagcagtgtcacacc
ttcgcctacagcagcagcaaaggctccatacgcctctgtgacatgaggcaggccgccctc
tgtgacaagcattgcaaatacttcgaagagccggaggatccatcaacacgctcctttttc
tccgaaattatctcctccatctccgatgttaagttcagccacaacgggcgctacctgatg
acaagggactacctcactgtcaaggtgtgggacctccagatggagaacaaaccactggaa
acctaccaggtccacgactacctgaggggcaaactctgctctctgtatgagaacgactgc
atctttgacaagttcgagtgcgtctggaacggatcggacagcgtcataatgaccggttcc
tacaacaatttctttcgaatgtttgaccggaacaccaaacgggacgtcacgctggaggcg
tccagagagaacagcaaacctagagctattctgaagcctcgaaaggtttgcgtcggtggg
aaacgacggaaggatgagatcagcgtagacagcctggacttcagcaagaagatcctccac
accacgtggcatccgcacgagaacatcattgccgtagcggccaccaacaacctctacatc
ttccaggacaaagtgaactaa
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