Cyprinodon variegatus (sheepshead minnow): 107086501
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Entry
107086501 CDS
T06110
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107086501 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107086501 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107086501 (shh)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C46: hedgehog family
107086501 (shh)
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Morphogens
107086501 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
Hom_end_hint
Vint
DUF7011
Motif
Other DBs
NCBI-GeneID:
107086501
NCBI-ProteinID:
XP_015232968
Ensembl:
ENSCVAG00000007661
UniProt:
A0A3Q2DW64
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MFNMHQRWTTIASVALICLSLVSYAVGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTL
GASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQ
WPGVKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYE
SKAHIHCSVKAENSVAAKSGGCFPGSSTVTLQDGTQKAVKDLQMGDKVLAADGHGNPVYT
DFIMFIDRDSATSRTFYVIETDSGQKITLTAAHLIFVAHENSTQSAVFASDVTPGQKVFV
HDGERDRLVAVNVKRIYTQQHEGSFAPVTAHGTVVVDQVLASCYAVIEDHQLAHWALAPV
RIAHWVSSSLFSSRPKVSAHSEGVHWYSKLLYQLGTWILDDHSMHPLGMSAYPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatgcatcagcgctggaccacaatcgcatctgtggctctcatctgcttgtcc
ttggtgtcctacgcggtgggatgcggaccgggcaggggctacggcaggaggagacacccc
aagaagctgacacctctggcgtacaagcagttcatccccaacgtggcggagaagaccctg
ggggcgagcggtagatacgagggcaagatcacacggaactccgagcgctttaaagagctc
acccccaattataacacagacatcatcttcaaggatgaggagaacacaggagcagacagg
atgatgactcagagatgcaaggacaaactgaactctctggccatctctgtcatgaaccaa
tggcctggggtgaagctgcgggtcacagagggctgggacgaggacggacaccacttcgat
gagtccctgcactatgagggcagggcggtggacatcaccacctcggatagagacaagagc
aagtacggcaccctgtccagactcgctgtggaagctggattcgactgggtctactatgag
tcgaaggcccacatccactgttctgtgaaagcagaaaactcggtggcagcaaagtcaggc
ggctgcttcccaggctcctccacggtcaccctgcaggatgggacccagaaggcggtcaaa
gacctgcagatgggcgataaggttctagctgcggacggccatgggaacccggtttacacc
gacttcatcatgttcatcgaccgagactccgccaccagccggaccttctacgtaatcgag
acagattcgggccagaagatcaccctcactgccgcgcatctcatcttcgtcgcgcacgag
aactccacgcagtctgcggtgttcgcgagcgacgtgacacccggacagaaggtgttcgtc
cacgacggggagcgggatcggctcgtggctgtgaacgtgaaacggatttacacccaacag
cacgagggctccttcgcaccggtgacggcgcacgggaccgtggtggtggaccaggtcctg
gcgtcctgttacgcggtgatcgaggaccatcagctggcgcactgggccctggcgccggtc
aggatcgcccactgggtgtcctcgtcgctgttcagctccaggcctaaggtcagcgcgcac
agcgaaggggtgcactggtactccaaactcctttaccaactggggacgtggatcttagac
gaccactcgatgcatccactggggatgtcagcatatccaagctga
DBGET
integrated database retrieval system
