Cyprinodon variegatus (sheepshead minnow): 107086521
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Entry
107086521 CDS
T06110
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
107086521 (zcchc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
107086521
NCBI-ProteinID:
XP_015232995
Ensembl:
ENSCVAG00000005640
UniProt:
A0A3Q2CGV2
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MIKMKLPMKTGDETAEDGSLDPSERLQVPRAASPPSVYQRLREPPPRDPASSLDRETVFE
WFGHHLNPAKRVEFMCGLLHMCQPLELRFLGSYLEDLARKDYHVLRDFEGRANNPSDLGV
LTDVTDPVVRSKLIVCLSLLGSDRRECAGILSRILSSVDLSFRSFGYPLSSFRDPQHHLH
PFYPPCQDGSVCEQNRVEPAGGALEQLALLYTLASLHPAFHFHQREVIRAQLDKIELCLE
EERRQQQLRMTAQPTEPMAQQVDYLTPSVQDLGELPASHPPCQSRRCSRWAAQREAVHIE
GIVLRGISRTGAEKEYSFDVKWSDSSSSSVTKTHHELENFLLKLPKDQCTESFEKSILRL
LSQGDQYESREVEKNLRERFLSAPPLFRQTRKVCSFFNCDSAHSSRPACSRCNLQPGKAY
QPDCSDASSQEEEGYVQGHKKKHASKSPSQLSSCTRSPQGDGWRGGHAAELNGPSDRRKK
GGPPRKSQEAEQQLDPDRRNQPTPKTKSRFLPVERDKGTIKGDGAAFVTNGGFLPALSPQ
RKAGASHPDVFGETSSESCSSPSSPQYRRRQSLESDDDNNKDTDSHSDDGGKGAAPDLFY
TRQSDAVAMGDVPSVLPMSSSSHKPRVEPPLPEAGAEFPPLPYMPSLGCLLPNGAADPDG
KPLMMPMAVQGPGMVGDAEKREVLTTFGAPPLALQPLVQRFRTALSHNQGAADPGADSAA
ISHQAPLRALGSMSPGPSPYSSPPLPPQDAGLPHIEAPHSKLHALSLPSPYALAPVPPSV
LPPLGAPVAPVVAPSPAPTAVPSNSPVPPPSLSPALSYSVTQTDSPSYSSPSASCGSASV
APGNPNPVQQTQQQQMPPQQQTPPPVGCGTCGCHNNCGSRVGSSSACQPTFYYPHQMAAA
VARQMFGVPQSLLYLTQAQAPPQANGPPTLPPFFPTGPPPVHPSPYLHPHSQAEAPSHMM
AAANYGLQQQMAQAGSFSQRLYQHVYPGHLGMPPATLGGGGINKKNGSVSCYNCGVNGHF
AQDCNQSTMDATQQGGFRLKYAASNISEALDNAD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgaagctaccgatgaaaactggcgacgagacggcggaggacggctctttg
gatccatccgagaggctccaggtccccagggcggcttcccccccctccgtctatcaaagg
ctccgggagccgccgccccgggaccccgcctcgagtctggacagggagaccgtgttcgag
tggttcggacaccacctgaaccccgccaagcgggtggagttcatgtgcgggctgctgcat
atgtgccagccgctggagctccgcttcctgggatcatacctggaggacctggccaggaag
gactaccatgttttacgggactttgagggcagggcgaacaacccgagcgatttgggggtt
ctaacggacgtgaccgacccggtggtccggtccaaactgatcgtgtgtctgtccctcctc
ggttctgacaggagggaatgtgctggaatactgtccaggatcctcagcagcgtggacttg
tccttcaggagcttcggctaccccctgtcctccttcagggacccgcagcatcacctccac
ccgttctacccgccctgtcaggacgggtccgtgtgtgagcagaaccgggtcgaaccggcc
gggggggctctggagcagctggcgctgctctacacgctggcctccctgcacccagccttc
cacttccaccagcgggaggtgatccgagctcagctggacaagatcgagctgtgcttggag
gaggagaggcggcagcagcagctgaggatgaccgcccagcctacggagccgatggctcag
caggtggactacctgaccccctcggtgcaggaccttggagagctcccggcctcccatcct
ccctgccagagccgccgctgcagtcgctgggcggcgcaaagagaagccgtgcatatcgag
gggatcgtgctcagagggatctctaggacaggagcggagaaggaatacagctttgatgtc
aagtggtcggactcttcctccagcagcgtgaccaaaacccatcatgaactggagaacttc
ctccttaagcttccaaaggatcagtgcacagagtcctttgagaaaagcattctgcgactt
ctgagccagggcgaccagtatgagagcagggaggtggagaagaacctcagggaaaggttt
ctttctgctccgcctcttttcagacagaccaggaaggtctgcagcttcttcaactgtgac
tccgcccactcctccagacccgcttgcagcagatgcaacttgcagcctggaaaggcctac
cagccagactgctctgacgcctccagtcaggaagaagaggggtacgttcaagggcacaag
aagaaacacgcatctaagagtccaagtcagctgtcgtcgtgcacaagaagcccccagggg
gacggctggaggggaggccatgcagcagagctgaacggaccctctgacagaagaaagaag
ggcggcccaccgaggaagagccaggaagcagagcagcagctggatccagacaggagaaac
cagcccaccccgaaaaccaagagcaggtttttacccgtagagagggacaaggggacaata
aagggtgacggagctgccttcgtgacaaacggcggctttcttccagccctgtcacctcag
aggaaagctggagcttcacatcccgacgtgttcggggaaacctcgtctgaaagctgcagc
tctccttccagccctcagtaccgaagacgccagagtctggaaagcgacgacgacaacaac
aaagacacagacagccactctgatgatggcggtaaaggcgcggctcctgatctgttctac
acgcggcagagcgatgcggtcgccatgggagatgtcccctcggtgcttcctatgtcttcc
agcagccacaagcctcgggtggagccccccctcccggaagccggcgcagagttccccccg
ctgccctacatgccctctctgggctgcctgctcccgaacggggccgccgatcctgacggg
aagccgctgatgatgccgatggccgtccagggccccgggatggtgggggacgcagagaag
agggaggtgctgacgacgttcggggccccgcctctggccctccagccgctggtccagagg
tttaggacggcgctgtcccataaccagggcgctgcagaccccggtgctgattctgccgcc
atctcacaccaggcccctctaagagctctgggctccatgtccccggggccctccccttac
tcttcccccccgctgcccccacaggatgcaggcctgcctcacatagaggccccccactcc
aagctgcacgccctcagcttaccatctccctacgccctggcccctgttcccccctctgtc
ctgccccctctgggggcccctgtggcccctgtagttgctccatctcctgcaccaacagct
gtcccctccaactcccccgtgcctcccccaagcctcagcccggcgctcagctacagcgtg
acgcagacggactcgccgtcgtacagcagccccagtgcttcctgtggaagtgcttctgtt
gcccctggcaacccaaaccccgttcagcaaacccagcagcagcagatgccccctcagcag
caaacgccgccgcccgtgggatgtgggacctgtggttgccataacaactgcggcagccgc
gtaggaagctcctccgcctgtcagcccaccttctactacccccaccagatggcagcagcg
gtagctcgccagatgttcggcgtccctcagtccctcctctacctcacccaggctcaggct
cctccccaggccaacgggccccccaccctccccccgttcttccccacaggtccgcccccc
gtacacccttccccctaccttcaccctcacagccaggccgaggcgccgtctcacatgatg
gccgccgccaactacggcctccagcaacagatggcgcaggccggttccttctcccagcgc
ctctaccagcacgtgtacccaggtcacctggggatgccgcccgccaccctgggagggggc
gggatcaacaagaagaacggctcggtgtcttgctacaactgcggcgtgaacggacacttc
gctcaggactgcaaccagtccaccatggacgccacacagcaaggtggcttcaggctaaaa
tacgcagcgtccaacatttcagaagcacttgacaatgctgactga
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integrated database retrieval system
