Cyprinodon variegatus (sheepshead minnow): 107086527
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Entry
107086527 CDS
T06110
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03010
Ribosome
cvg04120
Ubiquitin mediated proteolysis
cvg04137
Mitophagy - animal
cvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107086527 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107086527 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107086527 (rps27a)
04137 Mitophagy - animal
107086527 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cvg03011
]
107086527 (rps27a)
04121 Ubiquitin system [BR:
cvg04121
]
107086527 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107086527 (rps27a)
Ribosome [BR:
cvg03011
]
Ribosomal proteins
Eukaryotes
Small subunit
107086527 (rps27a)
Archaea
107086527 (rps27a)
Ubiquitin system [BR:
cvg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107086527 (rps27a)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107086527 (rps27a)
Exosomal proteins of colorectal cancer cells
107086527 (rps27a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
107086527
NCBI-ProteinID:
XP_015233007
Ensembl:
ENSCVAG00000004811
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaaaaccctcacggggaagactataaccctcgaggttgagccttca
gataccatagaaaatgtcaaagccaagatccaggataaggagggaatccctcctgaccag
cagaggctgatctttgccgggaagcagctggaagacgggcggacgctgtcggactacaac
atccagaaggagtccacgctgcacctggtgctgaggctgcgaggaggcgccaagaagagg
aagaagaagtcttacaccacccccaagaagaacaagcacaagaggaagaaggtcaagctg
gccgtcctcaagtactacaaggtggacgagaacgggaagatccaccggctgaggcgggag
tgtcccgctgacgagtgcggcgccggcgtcttcatggcgagccacttcgaccgccattac
tgcgggaagtgctgcctgacgtactgcttcaacaaacctgaggacaaatag
DBGET
integrated database retrieval system
