Cyprinodon variegatus (sheepshead minnow): 107086531
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Entry
107086531 CDS
T06110
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107086531 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107086531 (bbs4)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107086531 (bbs4)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
BBSome
107086531 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_12
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_9
TPR_7
ARM_TT21_2nd
ARM_TT21_4th
TPR_Slam
TPR_15
ARM_TT21_N
NatA_aux_su
TPR_10
TPR_20
PknG_TPR
ARM_TT21_C
Wzy_C_2
HAT_PRP39_C
ChAPs
RPN7
HrpB1_HrpK
CotJB
Motif
Other DBs
NCBI-GeneID:
107086531
NCBI-ProteinID:
XP_015233011
Ensembl:
ENSCVAG00000005366
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MADEENATLQNPVPTEAKKRRAPKAPELPIVERRNWLIHQHYLRKDYETCKVIIKEQLQE
SNGMCEYAIYVQALILRLEGKIQESLELFQSCAILNPSSSDNLKQVARSLFLLGKHKAAI
EFYHEAAKLNEKDWEISHNLGVCYYFIKDFKNAEEHLNTALQINKHDKTFTMLGKVHLLA
EETDKAIEVYKRAVEFSPENTELLTTLGLLYLQLGKYQKAFEHLGNALTFDPNNYKAILA
AGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSP
FDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRAY
EQAVNLDETNPMVNLNFAIFLYNHGDKQRALDQYQEMERKVNHLRDSSNNFEFDPELMDM
AQKMGTALQVTESVVWTKPGKDSKSKSHSAAAAKTPGAPLGTNQALGQAMSSAASYNKNI
QLTTGVSKGPPSAPQPEPDVEKAPSPPTDPPGSPKPEDPDRSRPISSKRKSKVEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagagaatgcaacgctgcagaatcctgttcctactgaagccaagaagcgc
cgtgcacctaaagctccagagcttcctattgtggagagaaggaactggctgatccaccag
cactatctgcgcaaagattatgagacctgtaaggtgatcattaaggagcaactgcaggaa
agcaatggaatgtgtgaatatgccatttatgttcaagcactaatcttacgtcttgagggg
aagatccaggagtccctggagctgtttcagagctgtgccatccttaatcccagcagctct
gataaccttaagcaagtggcccgatcactatttcttcttggaaaacacaaagcagctatt
gagttctatcatgaagctgcaaaacttaacgagaaagattgggagatcagtcacaacctg
ggtgtgtgttattacttcatcaaagatttcaaaaatgctgaggaacatctaaacacagct
ctccagataaataaacatgacaagaccttcacgatgctcggaaaggttcatctgctggct
gaagaaactgacaaggctattgaggtgtacaagagagcagtggaattctctccagagaac
actgaactcctcactactctaggtctcctttatctgcagcttgggaagtaccaaaaagca
ttcgagcacctcgggaatgccctcacttttgaccccaacaattataaggccatcctggct
gcaggcagcatgatgcaaacccacggtgactttgatgtggccatgaacaagtatagagtg
gcagcgtgtgccgtgccggagagcccccctctctggaacaacattggcatgtgtttcttt
ggcaagaagaaatatgtggcggccatcagctgcctgaagcgggctcactacttgtctccc
tttgactggaaagtgttgtataacctggggctggtacacctgaccatgcagcagtatgcg
tcagctttccatttcctcagtgcagccattaatctgaacccaagaatgggggagctctac
atgttgctggcagtggctctgactaatttggaagatgtggagaatgccacccgggcatat
gaacaagctgtgaatcttgatgaaaccaaccccatggtcaacctgaactttgccatattc
ctctacaatcatggtgacaagcagcgagctctggatcaatatcaggagatggaacggaaa
gtcaaccatcttcgggatagcagtaacaactttgagtttgaccctgagctgatggacatg
gctcagaagatgggcactgctctgcaggtgacagagagcgtggtttggactaaaccaggc
aaggactctaaatctaaatctcattcggcggcagcagccaaaaccccgggagctcctctg
ggcacgaaccaagctctgggtcaggccatgtcttccgctgccagttacaacaagaacatc
cagctaacaacaggcgtttccaaaggccccccctcagctcctcagccagagcctgatgta
gagaaagcccccagcccaccaactgaccctccaggatccccaaaaccggaagatccagac
cgttccagacccataagctcaaagaggaagtccaaggtggaggaatga
DBGET
integrated database retrieval system
