Cyprinodon variegatus (sheepshead minnow): 107086553
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Entry
107086553 CDS
T06110
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04350
TGF-beta signaling pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107086553 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107086553 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
V-set
Interfer-bind
NDNF
fn3_2
C2-set_2
Ig_5
Tissue_fac
Ig_4
Sp38
V-set_CD47
DUF4834
EphA2_TM
DUF4912
LapA_dom
Motif
Other DBs
NCBI-GeneID:
107086553
NCBI-ProteinID:
XP_015233040
Ensembl:
ENSCVAG00000005321
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MAERGAVPLLSLLCLTFLFTQTTAAKHVDKGSAAQPFVPFRFTVEPQDTLAIRGNSALLN
CSAHSDEDTPARIEWKKDGTFMSLVSDERRRILPDGSLFFTHVVHSKHNKPDEGTYQCVA
TIENLGSISSRTARLEVAGIPRFASQPSPASVHIGDSQVVACEVNSDLVPFTRWEKDKEA
LEMSDRLIQLPSGALVISNASEADAGLYRCVVENVGSSKSSEEALLQTIPETGGERKLEF
LVQPASVTKLLGASVLLPCVASGYPAPHIRWMLGDKVLEESDGRVEMVAGGSLQISNVTE
EDAGIYTCVAENSNATVEAQAQLTVQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPAFPPPSLTPNTTDHVTAGSGGIAAPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSVFYSQEGNSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVPHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGEILSYKLYYTDRSIGTEEDV
DIDGQSYTMAGLKKNTEYSFRVVANNKHGPGVSTEDVIVRTLSDVPSAPPQNLTLEVQNS
KSIIVRWQPPPLSGQNGEITSYKIRYRKVSRRSESAVTTAGTELFKLIDGLEPGTEYSFR
VSAVTVNGTGPATEWVPAETFESDLDETRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTISYGIGSPHAQTIKVDHKQRYYTIENLNSGSHYVITLKAFNNVGEGIPVYESAATR
VQSDPIDPDVDLYELFHAQYTPAPDPSPMMPPVGVQASVLSHDTIRVTWADNSLPKNQKI
TDNRHYTVRWKTNIPANTKVKMANSTSLNHVVTGLKPNTLYEFSVMVTKGRRSSTWSMTA
QGTTFETTPGSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKTESSDKMANDQA
SNLPPKPGSPSNIFPEDPRGTVGKTGVGGGEHHILIIVIIIAVGVFTIIVVVVGALLCTR
RSTSQQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETP
IPRTSQDITPADSGMESNPHLQQRRNSYRGHESDDSMSTLAGRRGMRPKMMMPFDAQPPQ
PVISAHPIHSLDNHHHHYHMGSLVSPTRGYLYHQGSGHPRPHACTTPISHLERVDSSESV
RNTPSSEPLPPPTASSQVSCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRPAHPHALA
HPLKSFAVPAIPVSSHPSYDSPALPSMPLLAQTGPPSHPHVVKTASIGTLGRTRTPMIVT
VPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMK
DLNAITTAP
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagccgtgccgctcctctctctcctctgtctcacctttctcttcacg
cagaccaccgcggcaaagcatgtcgataaaggctcagcagcccagcccttcgtccccttc
aggttcacggtggagccccaggacacgctggccatccgggggaactcggcgctgctcaac
tgctcggcacacagcgacgaggacacgccggcgcgcatcgagtggaagaaggacggcacc
ttcatgagcctggtttcagacgagaggcggcgcatcctcccggacggctcgctgttcttc
acgcacgtcgtccactcgaagcacaacaagcccgatgagggcacctaccagtgcgtggca
accatcgagaacctgggatccatttccagccgcacggcgcgcctcgaagtagcagggatt
ccaaggttcgccagtcagccgtctccagcctccgtgcatatcggggacagccaagtggtg
gcgtgtgaggtaaactcagacctggtgcctttcacccgctgggagaaggacaaggaagcg
ttggaaatgagcgacagattgatccagctgcccagcggggctctcgttatcagcaacgcc
tcggaggctgatgccggcctgtatcgctgtgttgtggaaaacgtgggttcctccaagtcc
agtgaggaggccttgctgcagacgataccagaaaccggaggagagaggaagctggagttt
ctggtgcagcctgcctctgtgaccaagctgctgggtgccagtgtgctgctgccatgtgtg
gcctcaggttatcctgcacctcacatccgctggatgctcggagacaaagtgctggaggaa
agcgatggtcgtgtagaaatggtggcaggcgggagcctccagatttccaacgtcacggag
gaagatgccggaatttacacctgcgtggccgaaaactccaacgccaccgtcgaagcccag
gcacagctcacagttcaagttcctcctcagtttgtcaaacggccggccaacatttacgcc
catgagtccatggacatcgtctttgagtgtgaagtttccggttcacccgctcccaccgtc
aaatgggtcaagaatggagacgccgtcatccccagtgactacttcaaaataattaaggag
cacaacctgcaggttctgggtctggtcaagtccgatgaaggtttctaccagtgtctggca
gagaacgatgccggcaacatccagtcgagcgcgcagctcatcatcttggatcacgacgta
gccctgcccgccttccctcccccttcactgactcctaacactactgaccatgtaacagca
ggctctggaggcatagccgccccagcggggcccaccccctctgcgccgcgagacgtcgtg
gcctccctggtctccacccgcttcatcaagctgacctggcgccagccggcggagccgcac
ggagatgagctgacctactctgtgttctacagtcaggagggcaacagcagggagcgagtg
gtgaacactagccgaccaggagagatgcaagtcaccatccagaatctgatgccagacact
aaatatcgcttcagggtggtgccacacaacagcaacgggcagggcgagagctcagcagcg
ctcaaagtggccacccaagctgaagtacaagtccctggtccagctcccaacctgcaggca
gtgtccaacactccgacgtccgtctcccttagctgggataaaccactcacaggcaacgga
gagatcctctcatacaagctctactacacagacagaagtatcggtaccgaagaggatgtt
gacatcgatggtcagtcatacaccatggctggactgaagaagaacacagagtacagcttc
cgtgtggtggctaataacaagcacggtcccggggtctccacggaggatgtcattgttcgg
acgctttctgatgttccaagcgcccctccccaaaacctcacattggaagttcagaactcg
aagagtatcatagttcggtggcagcctcctccgctcagtggccagaacggggaaatcacc
agctacaagatccgctaccgtaaagtttcccggaggagcgaatcagctgtgaccacagca
ggaactgagcttttcaagctcattgatggtctggagcctgggaccgagtactccttccga
gtttccgctgtgactgtaaacgggacgggaccagccaccgagtgggtcccagcagagaca
tttgagagcgacctggacgaaacccgtgtaccggaccaacccagctcgctccacgtccgc
ccgctggtcaacagcatcgtggtgagctggacgccgccagagaaccaggacatcgtggtg
cggggctacaccatcagctacggcatcggaagtccccacgctcaaaccatcaaagtggac
cacaagcagcgctactacaccattgagaacctcaactccggttcccattatgtgatcacg
ctgaaggccttcaacaatgtgggggaggggatccctgtgtacgagagcgcagccaccagg
gtgcagtcagaccccatagaccccgatgttgacttgtacgaactgttccatgcccaatac
accccagcaccagaccccagccccatgatgcctcccgtgggcgtgcaggcctccgtgctg
agccacgacaccatcagggtgacgtgggctgacaactcgctgcctaagaaccagaagatc
acagataaccgccactacacggtgcgatggaagaccaacatcccagccaatactaaagta
aagatggccaacagcaccagcctgaaccacgtagtgacaggtctgaagcccaacacgctc
tacgagttctccgtcatggtgaccaagggacgccgctccagcacatggagcatgacagct
caaggaaccacctttgaaaccacccccggctctgctccaaaagatgtgaccgtcgtgagc
aaagagaataaacctcgcaccataatagtgaactggcagcctccgtctgaagctaatgga
aaaattacaggttacattatctactacagcacagacgtaaacgcagtggtccacgactgg
gtcattgagcctgtggtggggaaccgcctcacgcaccagatccaggagctgacgctggac
acaacgtactacttcaagatccaggccaggaactccaaaggaatggggcccatgtcggag
gccgttcagttccgaactcccaagactgaatcctctgacaaaatggctaatgaccaagct
tcaaatctgccaccaaagcctggatctccaagcaatatctttccagaggaccctagaggt
acagttggtaaaacaggtgtcgggggtggtgaacatcacatcctgatcatcgtcatcata
atcgcagtaggagtcttcaccatcatagtggttgtggtcggagccttgctgtgcacacgg
cgcagcacgtcccagcagaagaagaagcgagccgcgtcaaagtcatcaaacggctcccat
aaatacaaaggaaattctaaagacctgaagccaccagatctttggattcaccacgagagg
ctggaactgaaacctatggacaagtcgccggatcccaaccccgtcatgaccgagacgccc
atccctcgcacctcgcaggacatcacgccagccgacagcggaatggagagcaacccccac
ctgcagcagaggcgcaactcctacagaggccacgaatcagacgacagcatgtccacacta
gcaggtcgccgagggatgagacctaaaatgatgatgccttttgacgcacagccacctcag
cctgtgattagtgctcatcccatccattccctcgataaccatcatcaccattatcacatg
ggcagcctggtatcaccgacacgcggctacctctaccatcaaggcagcgggcaccctcgc
ccgcacgcctgcaccacccccatctcccatttagaaagggtggactcctcagaatctgtg
aggaacacccccagctcggagcccctccctccacctacagcatcttcccaagtctcctgc
ccctctgagatcatggctgacccagagggcagctaccacggctccaccaccaccgaggaa
gagcccagctactccagcaacctgcccccacatcgcccagcccacccgcatgcccttgcc
caccccctcaagagctttgctgtacctgcaatcccagtctccagccatccctcatacgac
tcccccgccttacccagcatgcccctgcttgctcagactgggcctccctctcacccccat
gttgtaaaaacagcctccatcggaacactaggaaggacacgcactccaatgatagtaaca
gtacccaacgcccctgatgtaccagaaacaagcaaaatgctggaggatgtagacagcgtg
cttgcctccctccccccctgcccctccccagcccctcgcagtaaccctgttcctctccct
cagagctacgagcctgacgagctgactgaggagatggcgcacctcgagggcctgatgaaa
gacctgaacgccatcacaacagcgccatga
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integrated database retrieval system
