Cyprinodon variegatus (sheepshead minnow): 107086566
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Entry
107086566 CDS
T06110
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107086566
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107086566
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107086566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
TRIM_CC
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107086566
NCBI-ProteinID:
XP_015233094
Ensembl:
ENSCVAG00000003314
UniProt:
A0A3Q2DPL2
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MDASWKNCFEEELLCPICLNVFEEPIQLPCKHNFCKGCISEAWAKESAAVRCPECNHDYD
QKPALEKNFKLASIVKRFNALNAEKAPTVLHCVLCRRGPPLPVRKVCLRCKEPCCQTHIQ
THLQQTCAPPGHLLVDIEELSAWTCPTHEEYRLLHCEEEQVALCPFCCISHCTNQRHTVC
DVDTQRVQMQAMLMRQQDRLDCRVQNIDEQLSKLESDKTLLKEAVCELKERVRAQYQRMH
ALLEANQAEAVQMLESTYTMYTRKNSQQVLQLNEKRQESEKLLSSAQSFFQRAESLNFMK
NTKPYQLLMDKLNSHLSGAIPPLRVGQLNSHHFLSDLSTREKNLRKMLEEPFNETSILEI
VQSQSNQLGMSSGLQKRKYSMAFLDSNSENSSSQDNTHLIYSSKKAFLTEQGHRSSSVFS
SEVLPQTPHTSGFLDPAAHHMVGLGSSSSRHSGNLFPSSHFPSGGASQQPMYESRKVLMC
TLNNCCCSRAPAARAQPPYPPSDTFPSQDFSSHALLPASQPLQHYPVRGLMDTSQTSRHP
DFYGLYGQSSTKHYGTK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagctggaaaaactgctttgaggaggagcttctctgccctatttgcctgaat
gtttttgaggagccaatccagttgccttgcaagcacaacttctgcaaaggttgcatctct
gaggcttgggccaaggaaagcgcggcggtccgctgtcctgagtgtaaccatgactacgac
cagaaaccagcgttggagaagaactttaagctcgccagcatcgttaagcggtttaacgct
ctgaacgcggagaaggctcccactgtgctgcactgcgtcctctgcagacggggccccccg
ctgcccgtgaggaaagtgtgcctccgttgcaaagagccttgctgccagactcacatccaa
acgcacctccagcagacgtgcgcgccgccgggacacctgttagtagacattgaggagctg
agtgcctggacctgtcccactcatgaggaatacaggctgctccactgtgaggaagagcag
gtggctctgtgccccttctgctgcatctcccactgcacaaaccaaagacacacagtgtgt
gatgtggacacgcaacgcgttcagatgcaggccatgctaatgaggcagcaagacagactg
gattgtcgtgttcagaacatcgatgagcagctcagcaagctggagtcagataagaccctt
ctgaaggaggccgtgtgcgagctgaaggagcgtgtccgagctcagtaccagaggatgcac
gcgctgctggaggcgaaccaagcggaggccgtgcagatgctggagagcacttacaccatg
tacacgcgcaagaactcccagcaggtcttacagctcaatgagaagcggcaggagtcagag
aagctactgagctcggcgcagtcgttcttccaaagagcagagagtttaaacttcatgaag
aacaccaaaccttatcagctgctaatggataagttaaactcccatctcagtggggccatc
cctccactcagagtcggccagctcaactctcatcatttcctatccgacctctcaaccagg
gagaagaacctgcgaaaaatgctagaagaaccattcaatgagacgtccattcttgagatt
gtccagtctcaaagcaaccagctgggaatgagttcagggctgcagaagaggaaatacagc
atggctttcctggacagtaactcagaaaactcctcatctcaggataacacgcatttaatc
tatagcagcaaaaaggcctttctgaccgagcagggccaccgctcctcgtctgttttttcc
tcagaggtcctccctcagactccccatacctccgggttccttgaccctgctgcccatcac
atggtgggtctggggtctagctctagccgccactcaggaaaccttttcccctcctcccac
ttccccagtggaggagcctcgcagcaacccatgtatgagagcaggaaggttttgatgtgc
accctgaataactgctgctgctccagagccccggctgctcgcgcccagcctccgtacccg
ccctcagacaccttcccttctcaggacttctcgtcgcatgccctgcttcctgccagtcag
cccctgcagcattatcccgtcagaggcctgatggacacatcgcagacgtccagacacccg
gatttctacggcttgtatggccagtcttcaactaagcattatgggaccaaatga
DBGET
integrated database retrieval system
