Cyprinodon variegatus (sheepshead minnow): 107086613
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Entry
107086613 CDS
T06110
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107086613 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107086613 (ercc6)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107086613 (ercc6)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107086613 (ercc6)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107086613 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DegQ
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
107086613
NCBI-ProteinID:
XP_015233166
Ensembl:
ENSCVAG00000003829
UniProt:
A0A3Q2CCN3
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MPAEDGDLQASSSISSPVSAALTPGRLEEDGSTKGPAVCAFPENSQGSEAAAAFPANTGP
GEGNSAGKRAGALLQINRQRIQVASASSGADELQGLGVAVYDQDVLEQGVLQQVDEAIHE
ANQAAAKAEAEKEYQSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVKAKQKRLQAILGGEDVQRVEAELLAEDDGEEEAGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIPQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKKVPLLKKKKS
SALSLYEETKGKTGKTVSSSKDKKLKKRMRKLQINALRTQPKAQPKPEPKLPKSRRKRYT
EGEQTDSEGSEYLPSDEGLDLDQEERDAMEEGFGDDNDNDNDEYELKPYKKKAVGAGRKR
MKKNDSEDDYSPESSDDDSDNRSKSQKHKDDGDVEYYRQRIRRWKRQRLREREAKRERGE
ELTDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVI
SFLAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSF
TSKKEKLIPEIAACHGILITSYSAVRNLQDVLQRYDWHYVILDEGHKIRNPNAGVTVACK
QFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ
VQTAFKCACVLRDTINPYLLRRMKDDVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSK
EVYQILNGDMQVFPGLIALRKICNHPDLFSGGPRILKGIPEDQLTEEEHFGFWKRSGKLV
VVESLLRLWFKQGHRVLLFTQSRQMLDILEVFVREKDYSYLKMDGTTAIASRQPLIARYN
EDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRL
LTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGSQGTETSAIF
AGTGSDVKVPKKPDRLKASACINKVSRDYTKSSGKQVENREIPALRDCSLSLSSGNLPGK
SNAPMDSRSTNQNLELNDSTNMPLVKDNNNSDPVEKANKSLSSASYQQHRDKGKHREKRK
HCDSADVDKRKHKKHKRSWDARFEGHRISHLVKKRTYKKEESEENSTEDQRKSDDYVLAK
LFRKSGIHSVMQHDTIMQSSNPDYVLVEAEANRVAKDALKALKISRQRCRLPFDRPPDPP
AKKRFGQKKNPLLLTRSAPSAPPPIKCKDAAIVKMPVSKKPSAGLHFSGEGADDDSNSAP
LSSASLLAKIKARNHISKLSSQGTAAEEDEEEEVNGLGASGTSTPPAPPTEHDELLVDLR
NFVAFQANVDGEATTQEVLEYFKPRLSQKQAPVFRELLRSICDFHRTSGQEGIWRLKEHF
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaagatggagacctccaggcatcctcctccatctccagtccggttagtgct
gctctcaccccaggacgtttggaggaggatggatctacaaagggacctgctgtctgtgct
ttcccagagaacagtcagggttctgaggcagctgcagctttccctgccaacactggaccc
ggggagggtaacagtgctggcaagcgggcaggagcattgctgcagatcaaccgtcagcga
atccaagtggcatctgccagttctggagcagacgagctccaaggtcttggtgtggctgtg
tatgatcaggatgttctcgagcaaggtgttctccagcaggtggatgaggcgatccatgag
gcaaatcaggctgctgccaaagccgaggctgagaaggagtaccaatcagtgctagatgat
gtcagatctgttacagcatctttaaaacacatcaacaagattatcgagcagctatccccc
tatgctgcctctagcaaggatattagcaggaaaatagagtctgtaaaacggcagaaagaa
aataaggagaagcagcttaaaaaggtcaaagcaaaacagaagcgacttcaggccatactg
ggaggggaggacgttcagagagttgaggctgaactgctggcagaagatgatggagaggaa
gaagcgggaccgtccacactgggcagcatgctcatgccagcacaggaaaccgaatgggag
gaactcatccggaaaggccacatgacaccttttggtacccggataccacagaaggaggta
aagaaggagcctcggaaactgatgctggctgagaactctgcgtttgaccagtacttggcg
gaccaggccaagttggctaccgaacggaagaaggtaccccttcttaagaagaagaaaagt
tctgcactcagcctttatgaagagaccaagggtaaaacaggaaaaacagtttcctcatcc
aaggataaaaaactgaagaagcgcatgcgaaagctgcaaataaatgctttgaggactcaa
cctaaggctcaacctaagcctgaaccaaagcttcctaagtcacggaggaagagatacaca
gagggagagcaaacagacagcgaagggtcagagtacctgcccagtgatgaaggactggat
ttggaccaggaggaaagggatgccatggaagaaggctttggggatgataatgataatgat
aatgatgagtatgaactaaaaccatacaagaaaaaggctgtgggggcaggaaggaagaga
atgaagaaaaacgacagtgaggatgactactcccctgagagttcagatgatgacagtgat
aacaggagtaaatcccaaaaacataaagacgatggggatgtggagtactacaggcagcga
ataaggagatggaagcggcagcggcttcgagaacgagaggcgaaacgagaacgaggggag
gagcttacggacgacagcgatgccgaatttgatgaaggcttcaaagttcctggtttcctc
tggaaaaaactctacaagtaccagcagactggtgtgcggtggatgtgggaactccactgt
cagcaggcaggaggcatcctgggagatgagatgggattgggcaaaaccatccaggtcatc
agctttctggcaggactaagctacagtaaactgaggactagagggtccaactacagatac
gtcggtttaggtccaacagtgattgtgtgcccagctacggtcatgcaccagtgggtgaag
gagttccacacctggtggcctcctttcagagtggctgtcctgcatgaaactggctctttc
accagcaaaaaggaaaagctgattccagaaatagcagcatgtcatgggatcctgatcacc
tcctattcagctgtgagaaatttacaagacgtgttacagcgctacgactggcactatgtt
atactggacgagggccacaagatcaggaatccaaatgccggcgtcactgtcgcctgcaaa
cagtttcgtactcctcacaggttcatcctgtctggctcaccaatgcagaacaacttgaag
gagctgtggtctctctttgacttcgttttccctggcaaactagggacacttcctgtcttt
atggagcagttttctgtgccaataactatgggagggtacagcaatgcatcacctgtccag
gtccaaacggcgttcaaatgtgcctgtgtgctgagagatacaatcaatccttacctgctc
agaagaatgaaggatgacgtcaaggccaacctctccttacctgacaaaaacgaacaagtg
ctgttttgcagattaacagaggagcagcggcaagtttatcagagcttcttagattccaaa
gaagtgtatcaaatattgaatggtgacatgcaggtttttcctggtctgattgcactgcgc
aagatctgcaaccatccggaccttttctctggtgggccccggatcctgaagggaatacca
gaggatcagctcacagaggaggaacactttggcttttggaaacgatcagggaagttggtg
gtggtggagtcgctgctgcgtctctggttcaaacagggtcaccgtgtcctgctcttcact
cagtccagacagatgctggacatcctggaggtttttgtaagggagaaggactactcctac
ctgaaaatggacggcacgaccgcgatagcttccagacagccgctcattgctcgctacaac
gaggacaaatccatttttatcttcctgctgaccactaaagttggtggtctgggagtcaat
ctaactggagccaacagagttatcatatatgatccggactggaacccaagtacagacaca
caggctcgagagcgagcgtggaggatcggtcaaaagcagcaagtaaccatctacaggctg
ctgactgcagggaccattgaggaaaaaatctaccacaggcaaatcttcaagcagtttctc
accaatcgcgttctgaaggatcccaaacaaagacggttcttcaagtctaatgacatctat
gagctcttcactttggctgatcctgatggatctcaggggacagagaccagtgccatattt
gcaggcactggatctgatgtcaaagtacccaagaaacctgacaggttaaaggcatcggcc
tgcataaacaaagtcagccgtgattatacaaagtcctcaggaaaacaggttgaaaacagg
gaaatccctgccttaagagactgcagcttatccctatccagtgggaaccttccgggtaaa
tctaacgctccaatggacagtcggagcacaaatcaaaatttagaattgaatgattcgaca
aacatgcctctggtaaaagacaataacaactcggatccagttgagaaggcaaacaaaagc
ctgagctcggctagctatcagcagcacagagacaaaggaaagcacagggaaaagagaaag
cactgtgactccgccgatgtggacaaacgcaaacataaaaaacacaagcgctcctgggat
gctcggttcgaaggccaccgcatctcacatctggtgaagaaacgcacttacaaaaaagaa
gaaagcgaagagaattcaacagaagaccagagaaaatcggatgattacgtcttggcaaag
ctcttcaggaaatctggtatacacagtgtgatgcaacatgacaccatcatgcagtcttcc
aaccctgactatgttcttgtggaagctgaagccaacagggtggccaaagatgccctgaaa
gcgctcaagatttctcggcagcgttgcaggctgccttttgatagacctccagatccacct
gcgaagaaacgttttggacagaagaagaatcctcttttacttacgcgttctgctccatct
gcaccccctcctattaaatgcaaggatgccgctatcgtgaagatgcctgtttcaaagaaa
ccaagtgcaggacttcattttagtggggaaggggcagatgacgattcaaactcagctcca
ctgtcgtctgcttccctgctggccaagatcaaagctcgaaaccatatctctaagctctcc
tctcagggaacagcagcagaggaagatgaggaggaggaggtaaatggcctcggagcttca
ggaacaagcacccctcctgctcctccaacagagcacgacgagctgttagtggatctgcgc
aactttgtagccttccaggccaatgtggacggcgaggccaccacgcaggaagtcctggag
tatttcaaaccaagactgagccagaaacaggcccccgtcttcagagagctgctcaggagc
atctgtgacttccatcggacctccggtcaggagggcatctggagactgaaggagcacttc
cgctga
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integrated database retrieval system
