Cyprinodon variegatus (sheepshead minnow): 107086652
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Entry
107086652 CDS
T06110
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107086652 (nsun5)
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
107086652 (nsun5)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Other ribosome biogenesis factors
107086652 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
DUF6617
DUF1299
RDD1
Motif
Other DBs
NCBI-GeneID:
107086652
NCBI-ProteinID:
XP_015233227
Ensembl:
ENSCVAG00000001813
UniProt:
A0A3Q2C834
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MALYIKAAEILEKAEMKQGALKTLVYDSKFSNIKQLFALVCETQKFSSILQEIIESTKLL
KPTKLKMPLAKVLVYDLLIGQGLKCGGTWKAKMMKHRARLQAELARMKVRRKVSRNEDLL
PASAKQNPGDQLPRYVRVNTLKTTVEDAVDYLKRDGFSYLGQAVKLDNFTLKNKQFVIDL
HLPELLVFSPKTDFHDHFLYKAGHIILQDKASCLPAYLLNPPPGSHVIDACAAPGNKTSH
LAAIMKNRGKLFAFDLDGKRLATMSTLLLRAGVTCHQLANQDFLKVDPDGSQYKDVEYIL
LDPSCSGSGMVCLRDNSAANQEEEKARLASLASFQLRCLNHGLRFPRLKRLVYSTCSIHS
QENEEVIAACLQQNPNFRLVPLLPQWPERGLEPLPQCLRASTSKTLTHGFFVALLEKVSD
TSNIKEKPADPVSDVENVLPAAKIPDAAAEEKPGSAVEENPESSDAEEMVTLPAEDTNGD
APSKKRRRKRKKKKKNLSKAE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacatcaaagctgcggagatcctggagaaagcggagatgaaacagggcgcc
ctgaagactctggtttacgacagtaagttttccaacatcaagcagctcttcgctctggtt
tgcgagacgcagaagttctcctccatcctgcaggagatcatcgagagcaccaagctgctg
aagcccaccaagctgaagatgcccctggccaaggtgctggtatatgacctcctgatcggc
caggggctgaaatgcggcggtacctggaaggccaagatgatgaagcatcgggcccgcctg
caggcggaactggcccgcatgaaggtgaggagaaaagtcagcaggaatgaggatctcctt
ccagccagcgccaagcagaaccccggggaccagctgcccagatatgtccgtgtgaacaca
ctgaagaccaccgtggaggatgctgtggactacctgaagagggatggtttctcctacctg
ggtcaggccgtgaagctggataacttcaccctgaagaacaagcagtttgtgattgacctg
cacctgccagagctcctggtgttctctccaaagacagacttccatgatcacttcctgtac
aaggcaggtcacatcatcctgcaggacaaagccagctgcctccctgcttatctccttaac
cccccacctggcagccatgtcattgatgcctgtgctgcccctggcaataaaaccagccac
ctggcagccatcatgaagaacagagggaagctgtttgcatttgatctggatgggaagcgt
ttggccaccatgtcaaccctactgctcagagcgggggtcacctgccaccagctggccaac
caggacttcctaaaggtggatcccgatggttcacagtataaagatgtggaatacatcctg
ctggatccatcctgcagtggatcagggatggtttgcctacgggacaactctgcagcaaac
caggaggaggaaaaagctcgcctggcatctctggcttccttccagctgcggtgcctgaac
cacggcctcaggttcccccgcctgaagcgcctggtctactccacctgctccatccacagc
caggagaacgaggaagtcattgctgcctgtctgcagcagaaccccaacttcaggttagtg
ccactgctgccccagtggcctgaacgaggcctggagccgcttccacagtgtttacgtgcc
agtaccagcaaaactctcacacatggcttttttgttgctctgctggagaaagttagtgac
accagtaatataaaggagaaacctgcagatccagtcagtgatgttgagaacgtcctgcct
gctgcaaagatacctgatgctgctgcggaggaaaagcctggttctgctgtagaggaaaac
cctgaatcctcagatgctgaggagatggtgacattaccagcagaggacactaatggtgat
gcacccagtaagaaaaggaggagaaaaagaaaaaagaagaagaagaatttatccaaagca
gaatga
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integrated database retrieval system
