Cyprinodon variegatus (sheepshead minnow): 107086740
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Entry
107086740 CDS
T06110
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107086740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107086740
03021 Transcription machinery [BR:
cvg03021
]
107086740
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107086740
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
107086740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
107086740
NCBI-ProteinID:
XP_015233358
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLVPRSSPDIRMSKAPGEEKPGAEYPGDSSDSDRN
SPDDQLQVQMVKSSPYSLSPSAAGSKVKSDESSEITHSPAAAPAPPSQQQQQQQAQHHHT
QLMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAAHAAAQQQANQQQQQ
QQQQQPSKQEQPVQAPPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFLLSQ
PAQAQQPQQGLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKSSDAGISSSSSASVASS
GSSSGVTSVGASSASSSAMPSSLTSSLNPGSQTAHMSEEPSDLEELEQFARTFKQRRIKL
GFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVDSML
PSPSSISSPMLGMEGLPGRRRKKRTSIETNVRVVLERNFSTNQKPTSEEILLMAEQLNME
KEVIRVWFCNRRQKEKRINPSSSSTPPLPSQTSPVVTHKAHCYSPHMISSQSLSQVTTSL
STTGSSSSPSASCPMTPVSSAAMSSSVTPPPLPPHSTASPAPSSLGTSGLSTGNTMMGVS
TGMNQALIGSNPLATMQALAASGGQLPISSLEGGPGHMFLSGHGGHSVPPSLRPSLFLNR
PGLLPMVTCSTAASSMSTMGLVSSSAGGISGPRPSYCQSSPTGTSNLMSPTSCPEESASP
CSSPASFCSFSEASPPPLGGAMAE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggtcccgcggtccagccccgatatcaggatgtccaaagca
ccgggggaggagaagcctggagctgaatatccaggtgacagttcagactctgacagaaac
agccctgatgaccagctgcaggtccagatggtgaagagcagcccttacagcctctctccc
tcagcagcaggcagcaaggtaaagagcgatgaaagctcagagataacacacagcccggcg
gccgcccctgctcccccctcccagcagcagcagcagcagcaggctcagcatcaccacaca
cagctgatgctggcaggcagtcagctcgcagggctcgcggccctcctccccgcccagcag
cagctgctcctccagcaggcgcaggctcaactcctggcggcggccgttcagcaatcgaat
gccgctcacgccgccgcccacgccgccgcgcagcaacaggccaatcagcagcagcaacaa
cagcagcagcagcagccgagcaaacaggagcagccggtccaggctccgcctccacagctg
gccctgtcgcagcccatccagctcaccgcgcaggacatccagcagctgctgcagctccag
cagctggttctcatgccgggtcatcccctccagtccccggcccagttcctcctgtcgcag
cctgcacaggcccagcagccacagcagggtttgctctccacagcaaatctgatccagcta
cctcagcagagcgcaggaggacttctcacaagcccgcctcgcatgggactccaagcacag
agggagaagagcagcgacgcaggaatcagcagcagcagctcagcctctgtagcttccagt
ggaagcagcagcggcgtaacatctgtaggagcatcctctgcatccagcagcgccatgccc
tcctccctcacctccagcctgaaccccggcagtcagacagcccacatgagcgaagaaccg
agcgacctggaggagctggagcagttcgctcgaaccttcaaacagcggcgcattaagctg
ggattcacacagggcgacgtgggcgtggccatgggaaagctgtatggaaatgacttcagc
cagaccaccatctctcgctttgaagctttaaacttgagctttaagaacatgtgcaagctg
aagccgctgctagagaagtggctgagtgacgcagaaacgatggcggtggacagcatgctg
cccagcccctcctccatctcctcccccatgttgggcatggagggtcttcccggccgacgc
agaaagaaacgcaccagcatcgagacaaacgtccgagtggtgcttgagcgcaacttcagc
acgaaccagaagccgacgtcagaggagatcctgctgatggcggagcagctgaacatggag
aaggaggtgatccgtgtttggttctgcaaccgccggcagaaggagaaacgcatcaacccg
tccagcagcagcactcctcccctgcccagccagacctcgcctgtcgtgacgcacaaagcc
cactgctacagcccccacatgatatcgagtcagagtctctcccaggtcaccaccagcctc
agcacaacaggatccagctcgtcaccttcagcttcctgccccatgacgcccgtcagctcg
gccgccatgtcctcctctgtgactcctcctcctcttcctcctcacagcacagccagtcct
gctccttccagcctcgggacgtctgggctctccactgggaacacaatgatgggagtaagc
acagggatgaaccaggccctcatcggcagtaatcccctggccaccatgcaagctctggca
gccagcggcggtcagctacccatctccagcctggagggggggccgggccacatgtttctg
agcggacacggcggtcactccgtgcccccctccctccgcccctctctcttcctgaaccgc
cctggcctcctgccaatggtgacttgctcgacagcagcttcctccatgtccaccatgggg
ctggtcagcagcagcgcgggcggcatcagcggccccagaccctcctattgccaatcctca
cccaccggcaccagcaacctcatgagccccacttcatgcccagaggagtctgcgtctccc
tgttcgagtcccgcctctttctgctccttcagcgaagcctcgccgccgcccctgggagga
gccatggcggagtga
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integrated database retrieval system
