Cyprinodon variegatus (sheepshead minnow): 107086806
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Entry
107086806 CDS
T06110
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
cvg04148
Efferocytosis
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107086806 (vps33a)
04148 Efferocytosis
107086806 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107086806 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107086806 (vps33a)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107086806 (vps33a)
Hops complex
107086806 (vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
107086806
NCBI-ProteinID:
XP_015233491
Ensembl:
ENSCVAG00000018167
UniProt:
A0A3Q2D9B3
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MAAHLSYGRVNLNILREAARKELREFLDKCAGTKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPPADVKNIIFFVRPRLELMDIIAENIFSEDKMHPARDFHILFVPRRSML
CEQRLKEQGVLGSFVNIDEYILDLIPFDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGDCARHVANMMLRMKREFAGIQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGIHNGYVKLPPEKFAQKKQGEGSKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAEL
VKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDSIAQKDPLIKILRLVCMQSVCNNGL
KQKVLDYYKREILQTYGYEHILTLSNLEKAGLLKPQTASRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPSGLHKKRQQG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDSGMEYIIATTKLINGTNWMKSLMDRPQSQTS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccatctgtcctacggcagagttaatttaaacatcttgagagaagcggcacga
aaagagcttcgagaatttttggacaaatgtgcaggaactaaggccatagtttgggatgag
tacctgactggaccttttggtctgatagctcagtattctttgcttaaggaacatgaagtg
gaaaagatgtttaccctgaagggtggcagactcccccctgctgatgtgaaaaacatcatc
ttctttgtccgtcccaggctggaacttatggacatcattgctgagaatatatttagtgaa
gacaagatgcatccagcacgtgattttcacattctgttcgtgccccggcgcagcatgctg
tgcgaacagcggctgaaggagcagggagtgctgggctccttcgtcaacatcgatgaatat
atcctggacctgattccgtttgatggtgacctgctctccatggagtatgaaagtgctttt
agggagtgctacttagaaaatgaccagaccagtttgtaccacacagccaaaggcctcatg
accttacaggccctctatggtaccatccctcagatatttgggaaaggagactgcgcacgg
catgtggccaacatgatgttgcggatgaagagagagtttgccggcattcagaatcagatc
ctccccgtcttcgatactcttcttctcctggaccgtaatgttgacctgctgacccctctt
gcaacacagctcacctacgagggtcttattgatgagatctatggaattcataatggctat
gtcaagctacctcctgaaaagtttgcacaaaagaagcaaggtgaaggtagtaaagatctg
cccacagagcccaagaagttgcaactgaactcagctgaggagctgtacgctgaaatccgt
gacaaaaacttcaatgctgttggtgcagcacttagcaaaaaagccaaaattatatcagca
gcctttgaggaacgccataatgctaaaacagttggcgagataaagcagtttgtgtctcag
ttgcctcacatgcaggcagcacgaagctcgctggctaaccacacctctattgctgagctg
gttaaagatataacaacatcagaggccttctttgataatctgacagtggagcaggagttt
atgactggtgttgacacagacaaggtgaacacatacatagaggacagcattgcccaaaag
gatccgctgattaagattctgcgcctggtgtgcatgcagtcagtctgtaacaatggcctc
aagcagaaggttctggactactacaagagggagatcctccagacgtatggctatgagcat
atactaacactgagcaacttagagaaggcgggtcttttaaagccacagacagcttcaaga
aataactacccaactatcagaaagactcttaaactgtggatggaagacgccaacgagcag
aacccgaatgacatctcgtacgtgtacagcggctacgctccactcagcatccgactgact
caggtgctggcgagaccaggatggcgtagcatcgaagaggtcctaaagatgctcccaggt
cctcacttcgaggagaggcagcagctcccatctggacttcataagaaacgccaacagggg
gaaaaccgaaccacgctggttttcttcctgggtggggtgacgtatgcagaaatagccgct
ctgcgtttcctctctcagatggaagacagcgggatggagtacatcatagctaccacaaag
ctcatcaatggcaccaactggatgaaatccctcatggaccgaccacaatcccagacttcc
tga
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