Cyprinodon variegatus (sheepshead minnow): 107086900
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Entry
107086900 CDS
T06110
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
cvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107086900 (ube4b)
04120 Ubiquitin mediated proteolysis
107086900 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107086900 (ube4b)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107086900 (ube4b)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
U-box type E3
107086900 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
107086900
NCBI-ProteinID:
XP_015233655
Ensembl:
ENSCVAG00000017058
UniProt:
A0A3Q2D7C4
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGISPQPVTPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
PASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEDQALHLISKILRVS
WKEQDRDVIFLPSLAADFHQNPRDVYSDFKDLISQILMEVLMMSSQSNVHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSQGSSPMGPSAGSFGASSLSSLYGCGSPHPMALNAAGRTCP
SLSTPTTPTLPAATSTPQFVVPPSPPATPSTRLSLNPSSTPMPISQRYRPYSVTTPWAAS
SPLSPVPRGYSFPGLSPSPATPSVPPNTPLPATPLSPQSIILSSPRSGNHRPSSTLPVGP
SSPRMRARQAAFAARMPSSSPLSLLFFALSDMSQDSSDEESEEEEEDFAQVQFGSSLGAS
GGGMSCDSVSDRFTIETCKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQ
CISHVALVLQGALTQPRSPLQQSLLVPYMLCRNLPYGFIQELVRITHQEEDVFRQIFIPI
LHGLALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCNLATSLPLWCPKPLSPGCGR
EIQRLSYLGAFFSLSVFAEDNTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKV
LHNVLLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKL
ETVDPYYIFHPRCRLVVSLEETRLKATMEDLKSWMAELHEDPSKFSEPKFPTECFFLTLH
THHLSILPCCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKL
VRAKACADVGLLDENLLRRCLQFYSTVIQLILRSVDPAYPNITLPLNSEIPKSFAALPEF
YVEDVAEFLLFVVQYSPQVLYEPCVQDVVTFLVVFICSQHYIRNPYLIAKLVEVLFVTNP
AVQPRTQRFSEMMENHPLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSL
WQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQ
LPREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNF
NLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELF
EEVISKMRKAGIKSSIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTD
PVMLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGARPL
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttgagcgcagatgagatccgcagaaggcggctggcacggctggcaggagga
cagacatcacaacccagcaccccgctcagtacccccctcacatccccacagagagagact
ccacctggacccctccctggcccctcaggcatctcaccccaacctgtaacaccagctgcc
tcccaatctttgggcctcaatgtccacagtggaacccctgccacatcccctatgggaacc
tctggggtggcgtatggcagtcagagcagtgaaggtgtaagctccctctccagctccccc
tccaacagcctcgagacacagtctcagagtttgtctcgatcgcagagcatggacattgac
cctgcctcctgcgaaaagagcatgtcccaggtggatgtggactcagggattgaaaacatg
gaggtggaggacagtgatcgcagggagaagagaaacttgactgagaaggaaacctctgca
aattctgatgtctctgaagatcaggctcttcacctgatttccaagatcctccgcgtatcg
tggaaggagcaggacagagatgttatctttctcccttcactagctgcagattttcaccaa
aaccctagagatgtgtactccgacttcaaagacctcatcagccagattctgatggaagtg
ttaatgatgtcgtcccagtcaaatgtccacaaccccttcgccagcttgactgccacttct
cagcccattgcagccgcaaaatcccccgaccaccgcctgacgctggtgcagccttctagc
caaggcagcagcccaatgggccccagtgcaggctcctttggagccagctctctgtccagt
ttatatggttgcggtagtcctcatccaatggctttgaatgcagcaggaagaacttgccca
tctctctctacccctactacacccactctacctgcagccacctccacaccacagtttgta
gttccccccagcccacctgccactcctagtaccaggctctcccttaatccctcatctacc
cccatgcctatctctcagcgatatcgtccctattccgtcaccacaccctgggcagcctct
tctccactcagcccagttcccagaggatatagtttccctggtctttctcccagtccagct
acaccctccgttcctccaaacaccccacttccagccacacctttaagcccccagtccatt
attttgagctcaccaaggtctgggaaccatcgcccctcctcaacccttcctgttggccct
tcttctcccagaatgagagctcgacaagctgcctttgctgccaggatgccatcatctagt
cccttgtcgctcctgttttttgccctttctgacatgtcccaagacagcagtgatgaagag
tctgaggaggaggaagaggattttgcacaggttcagtttgggtccagtctgggtgcctct
ggaggggggatgtcatgtgattcagtcagcgacaggttcaccattgaaacgtgcaaagag
acagagatgctgaactacctcattgagcgttttgacagtgttggcatggaggaaagaaaa
gctcccaagatgtgcagccaaccgaatgtcagccagcttctcagtaacattcgctctcag
tgtatttcccatgttgcccttgtcctccagggagctctgacccagcctcggagccccctt
caacaatccctgctggtaccttacatgctgtgccggaatcttccgtacggctttattcag
gagttggtgcgcattacccatcaggaagaggacgtgttcagacagatcttcattcccatt
ctccatggactcgcactggcagtgaaagaatgttcctttgacagtgacaactttaaattt
cccctcatggcattagctgagctttgtgagatcaagtttgggaaaacacatcctgtgtgc
aacctggccacatcgcttcctctgtggtgtccgaaacctctgagccctggttgtggcaga
gaaatacagagactgtcctaccttggggccttctttagcctttcagtatttgcagaggat
aataccaaagtaggagacaagtatttctctggcccagccatcaccatggagaacacccga
gtcgtcagccagtctttgcaacactatctggagtcggcaagaggtgacctttttaaagtt
ctccataatgttctgctgaatggagagacgcgcgagttagctctgaattacatggcagct
ctagtcaactataatgtgaagaaagcccagatgcagactgatgacaagctggtgtcaaca
gacggcttcatgctcaacttcttatgggtgctgcagcagctgagcatgaaaatcaagcta
gagacagttgacccctattacattttccatccacggtgtcgccttgtcgtcagcctggaa
gagactcgtctgaaagccacaatggaggatctgaaaagctggatggctgaactgcacgaa
gatccctccaagttctcggaacccaagttccccaccgagtgtttcttcttaacacttcac
acccaccacttgtccatcctgccgtgctgtcggcgctacatccgcagattacgcgccatc
cgtgaactcaacaggactgtagaagagttaaaaaacagcgagagccaatggaaagattct
cccctggctagtcggcacagagaaatgctgaaacgatgtaaaacccagctcaagaaactg
gtgcgagccaaagcgtgcgctgacgtgggccttctggacgagaacctgctccgcagatgt
ctgcagttttacagcacagtcattcagctcatacttcggtcggtggaccctgcctacccc
aacattacccttcctttgaactctgagattcccaaaagctttgctgctctaccagagttt
tacgttgaagatgtggcagagtttttgctttttgttgtgcagtactccccccaggtttta
tatgagccgtgtgtccaggatgtcgtcaccttcctggtggtgttcatctgcagtcagcac
tacatcaggaacccttaccttatagccaagttggtggaggtgctgtttgtcaccaaccct
gctgtacagcctcgtactcagagattctctgaaatgatggaaaaccacccattgtccatc
aaacacctggtccctgctcttatgaagttttacactgatgttgagcacactggtgctacc
agcgagttctatgataagttcactatacggtaccacatcagtaccatcttcaagagcctc
tggcagaacattgcccaccatggcaccttcatggaggagttcaactctggaaagcagttt
gttcgctacattaacatgctgattaatgacaccaccttcctgttagatgagagccttgaa
tctctgaaacgtatccatgaggttcaggaggagatgaagaataaggagcagtgggatcag
ctgcccagagagcagcagcagagccggcagtcccagctgacccaggatgagcgagtgtct
cgctcctatctggcactggctacagaaacggttgaaatgttccacatcctaaccaagcag
gttcagaagcctttcctcaggcctgagctcggacctcgtttagctgctatgctgaacttt
aaccttcagcagctctgtgggcccaagtgtcgggacctaaaggtggagaacccagagaaa
tatggctttgagcccaagaagctcctagaccaactgactgacatctaccttcaactagac
tgtgcccgctttgctaaagcaatcgcagatgaccagcgatcatacagccgtgaacttttc
gaggaggtgatttccaagatgcgaaaggccggtattaagtcctccatcgccattgagaaa
ttcaagttgctgtccgagaaggtggaagaaatagtcgctagaaactctcagtcagagatg
gactacagtgacgcacccgatgagttcaaagaccctctgatggacacactgatgactgac
cctgtgatgctgccctcggggaacattatggacagatccatcatcttgcgccacctgctg
aactcccccactgaccccttcaacagacagcccctcacagagagcatgctggagtcagtg
cctgaactgaaggagagaatccacgcctggatgagagagaagcagggtgctcgccctctc
taa
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integrated database retrieval system
